Cargando…
Pests, diseases, and aridity have shaped the genome of Corymbia citriodora
Corymbia citriodora is a member of the predominantly Southern Hemisphere Myrtaceae family, which includes the eucalypts (Eucalyptus, Corymbia and Angophora; ~800 species). Corymbia is grown for timber, pulp and paper, and essential oils in Australia, South Africa, Asia, and Brazil, maintaining a hig...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8110574/ https://www.ncbi.nlm.nih.gov/pubmed/33972666 http://dx.doi.org/10.1038/s42003-021-02009-0 |
_version_ | 1783690327670915072 |
---|---|
author | Healey, Adam L. Shepherd, Mervyn King, Graham J. Butler, Jakob B. Freeman, Jules S. Lee, David J. Potts, Brad M. Silva-Junior, Orzenil B. Baten, Abdul Jenkins, Jerry Shu, Shengqiang Lovell, John T. Sreedasyam, Avinash Grimwood, Jane Furtado, Agnelo Grattapaglia, Dario Barry, Kerrie W. Hundley, Hope Simmons, Blake A. Schmutz, Jeremy Vaillancourt, René E. Henry, Robert J. |
author_facet | Healey, Adam L. Shepherd, Mervyn King, Graham J. Butler, Jakob B. Freeman, Jules S. Lee, David J. Potts, Brad M. Silva-Junior, Orzenil B. Baten, Abdul Jenkins, Jerry Shu, Shengqiang Lovell, John T. Sreedasyam, Avinash Grimwood, Jane Furtado, Agnelo Grattapaglia, Dario Barry, Kerrie W. Hundley, Hope Simmons, Blake A. Schmutz, Jeremy Vaillancourt, René E. Henry, Robert J. |
author_sort | Healey, Adam L. |
collection | PubMed |
description | Corymbia citriodora is a member of the predominantly Southern Hemisphere Myrtaceae family, which includes the eucalypts (Eucalyptus, Corymbia and Angophora; ~800 species). Corymbia is grown for timber, pulp and paper, and essential oils in Australia, South Africa, Asia, and Brazil, maintaining a high-growth rate under marginal conditions due to drought, poor-quality soil, and biotic stresses. To dissect the genetic basis of these desirable traits, we sequenced and assembled the 408 Mb genome of Corymbia citriodora, anchored into eleven chromosomes. Comparative analysis with Eucalyptus grandis reveals high synteny, although the two diverged approximately 60 million years ago and have different genome sizes (408 vs 641 Mb), with few large intra-chromosomal rearrangements. C. citriodora shares an ancient whole-genome duplication event with E. grandis but has undergone tandem gene family expansions related to terpene biosynthesis, innate pathogen resistance, and leaf wax formation, enabling their successful adaptation to biotic/abiotic stresses and arid conditions of the Australian continent. |
format | Online Article Text |
id | pubmed-8110574 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-81105742021-05-11 Pests, diseases, and aridity have shaped the genome of Corymbia citriodora Healey, Adam L. Shepherd, Mervyn King, Graham J. Butler, Jakob B. Freeman, Jules S. Lee, David J. Potts, Brad M. Silva-Junior, Orzenil B. Baten, Abdul Jenkins, Jerry Shu, Shengqiang Lovell, John T. Sreedasyam, Avinash Grimwood, Jane Furtado, Agnelo Grattapaglia, Dario Barry, Kerrie W. Hundley, Hope Simmons, Blake A. Schmutz, Jeremy Vaillancourt, René E. Henry, Robert J. Commun Biol Article Corymbia citriodora is a member of the predominantly Southern Hemisphere Myrtaceae family, which includes the eucalypts (Eucalyptus, Corymbia and Angophora; ~800 species). Corymbia is grown for timber, pulp and paper, and essential oils in Australia, South Africa, Asia, and Brazil, maintaining a high-growth rate under marginal conditions due to drought, poor-quality soil, and biotic stresses. To dissect the genetic basis of these desirable traits, we sequenced and assembled the 408 Mb genome of Corymbia citriodora, anchored into eleven chromosomes. Comparative analysis with Eucalyptus grandis reveals high synteny, although the two diverged approximately 60 million years ago and have different genome sizes (408 vs 641 Mb), with few large intra-chromosomal rearrangements. C. citriodora shares an ancient whole-genome duplication event with E. grandis but has undergone tandem gene family expansions related to terpene biosynthesis, innate pathogen resistance, and leaf wax formation, enabling their successful adaptation to biotic/abiotic stresses and arid conditions of the Australian continent. Nature Publishing Group UK 2021-05-10 /pmc/articles/PMC8110574/ /pubmed/33972666 http://dx.doi.org/10.1038/s42003-021-02009-0 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Healey, Adam L. Shepherd, Mervyn King, Graham J. Butler, Jakob B. Freeman, Jules S. Lee, David J. Potts, Brad M. Silva-Junior, Orzenil B. Baten, Abdul Jenkins, Jerry Shu, Shengqiang Lovell, John T. Sreedasyam, Avinash Grimwood, Jane Furtado, Agnelo Grattapaglia, Dario Barry, Kerrie W. Hundley, Hope Simmons, Blake A. Schmutz, Jeremy Vaillancourt, René E. Henry, Robert J. Pests, diseases, and aridity have shaped the genome of Corymbia citriodora |
title | Pests, diseases, and aridity have shaped the genome of Corymbia citriodora |
title_full | Pests, diseases, and aridity have shaped the genome of Corymbia citriodora |
title_fullStr | Pests, diseases, and aridity have shaped the genome of Corymbia citriodora |
title_full_unstemmed | Pests, diseases, and aridity have shaped the genome of Corymbia citriodora |
title_short | Pests, diseases, and aridity have shaped the genome of Corymbia citriodora |
title_sort | pests, diseases, and aridity have shaped the genome of corymbia citriodora |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8110574/ https://www.ncbi.nlm.nih.gov/pubmed/33972666 http://dx.doi.org/10.1038/s42003-021-02009-0 |
work_keys_str_mv | AT healeyadaml pestsdiseasesandaridityhaveshapedthegenomeofcorymbiacitriodora AT shepherdmervyn pestsdiseasesandaridityhaveshapedthegenomeofcorymbiacitriodora AT kinggrahamj pestsdiseasesandaridityhaveshapedthegenomeofcorymbiacitriodora AT butlerjakobb pestsdiseasesandaridityhaveshapedthegenomeofcorymbiacitriodora AT freemanjuless pestsdiseasesandaridityhaveshapedthegenomeofcorymbiacitriodora AT leedavidj pestsdiseasesandaridityhaveshapedthegenomeofcorymbiacitriodora AT pottsbradm pestsdiseasesandaridityhaveshapedthegenomeofcorymbiacitriodora AT silvajuniororzenilb pestsdiseasesandaridityhaveshapedthegenomeofcorymbiacitriodora AT batenabdul pestsdiseasesandaridityhaveshapedthegenomeofcorymbiacitriodora AT jenkinsjerry pestsdiseasesandaridityhaveshapedthegenomeofcorymbiacitriodora AT shushengqiang pestsdiseasesandaridityhaveshapedthegenomeofcorymbiacitriodora AT lovelljohnt pestsdiseasesandaridityhaveshapedthegenomeofcorymbiacitriodora AT sreedasyamavinash pestsdiseasesandaridityhaveshapedthegenomeofcorymbiacitriodora AT grimwoodjane pestsdiseasesandaridityhaveshapedthegenomeofcorymbiacitriodora AT furtadoagnelo pestsdiseasesandaridityhaveshapedthegenomeofcorymbiacitriodora AT grattapagliadario pestsdiseasesandaridityhaveshapedthegenomeofcorymbiacitriodora AT barrykerriew pestsdiseasesandaridityhaveshapedthegenomeofcorymbiacitriodora AT hundleyhope pestsdiseasesandaridityhaveshapedthegenomeofcorymbiacitriodora AT simmonsblakea pestsdiseasesandaridityhaveshapedthegenomeofcorymbiacitriodora AT schmutzjeremy pestsdiseasesandaridityhaveshapedthegenomeofcorymbiacitriodora AT vaillancourtrenee pestsdiseasesandaridityhaveshapedthegenomeofcorymbiacitriodora AT henryrobertj pestsdiseasesandaridityhaveshapedthegenomeofcorymbiacitriodora |