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The cytochrome P450 (CYP) superfamily in cnidarians
The cytochrome P450 (CYP) superfamily is a diverse and important enzyme family, playing a central role in chemical defense and in synthesis and metabolism of major biological signaling molecules. The CYPomes of four cnidarian genomes (Hydra vulgaris, Acropora digitifera, Aurelia aurita, Nematostella...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8110760/ https://www.ncbi.nlm.nih.gov/pubmed/33972594 http://dx.doi.org/10.1038/s41598-021-88700-y |
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author | Pankov, Kirill V. McArthur, Andrew G. Gold, David A. Nelson, David R. Goldstone, Jared V. Wilson, Joanna Y. |
author_facet | Pankov, Kirill V. McArthur, Andrew G. Gold, David A. Nelson, David R. Goldstone, Jared V. Wilson, Joanna Y. |
author_sort | Pankov, Kirill V. |
collection | PubMed |
description | The cytochrome P450 (CYP) superfamily is a diverse and important enzyme family, playing a central role in chemical defense and in synthesis and metabolism of major biological signaling molecules. The CYPomes of four cnidarian genomes (Hydra vulgaris, Acropora digitifera, Aurelia aurita, Nematostella vectensis) were annotated; phylogenetic analyses determined the evolutionary relationships amongst the sequences and with existing metazoan CYPs. 155 functional CYPs were identified and 90 fragments. Genes were from 24 new CYP families and several new subfamilies; genes were in 9 of the 12 established metazoan CYP clans. All species had large expansions of clan 2 diversity, with H. vulgaris having reduced diversity for both clan 3 and mitochondrial clan. We identified potential candidates for xenobiotic metabolism and steroidogenesis. That each genome contained multiple, novel CYP families may reflect the large evolutionary distance within the cnidarians, unique physiology in the cnidarian classes, and/or different ecology of the individual species. |
format | Online Article Text |
id | pubmed-8110760 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-81107602021-05-12 The cytochrome P450 (CYP) superfamily in cnidarians Pankov, Kirill V. McArthur, Andrew G. Gold, David A. Nelson, David R. Goldstone, Jared V. Wilson, Joanna Y. Sci Rep Article The cytochrome P450 (CYP) superfamily is a diverse and important enzyme family, playing a central role in chemical defense and in synthesis and metabolism of major biological signaling molecules. The CYPomes of four cnidarian genomes (Hydra vulgaris, Acropora digitifera, Aurelia aurita, Nematostella vectensis) were annotated; phylogenetic analyses determined the evolutionary relationships amongst the sequences and with existing metazoan CYPs. 155 functional CYPs were identified and 90 fragments. Genes were from 24 new CYP families and several new subfamilies; genes were in 9 of the 12 established metazoan CYP clans. All species had large expansions of clan 2 diversity, with H. vulgaris having reduced diversity for both clan 3 and mitochondrial clan. We identified potential candidates for xenobiotic metabolism and steroidogenesis. That each genome contained multiple, novel CYP families may reflect the large evolutionary distance within the cnidarians, unique physiology in the cnidarian classes, and/or different ecology of the individual species. Nature Publishing Group UK 2021-05-10 /pmc/articles/PMC8110760/ /pubmed/33972594 http://dx.doi.org/10.1038/s41598-021-88700-y Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Pankov, Kirill V. McArthur, Andrew G. Gold, David A. Nelson, David R. Goldstone, Jared V. Wilson, Joanna Y. The cytochrome P450 (CYP) superfamily in cnidarians |
title | The cytochrome P450 (CYP) superfamily in cnidarians |
title_full | The cytochrome P450 (CYP) superfamily in cnidarians |
title_fullStr | The cytochrome P450 (CYP) superfamily in cnidarians |
title_full_unstemmed | The cytochrome P450 (CYP) superfamily in cnidarians |
title_short | The cytochrome P450 (CYP) superfamily in cnidarians |
title_sort | cytochrome p450 (cyp) superfamily in cnidarians |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8110760/ https://www.ncbi.nlm.nih.gov/pubmed/33972594 http://dx.doi.org/10.1038/s41598-021-88700-y |
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