Cargando…

Development of a Loop-mediated isothermal amplification (LAMP) technique for specific and early detection of Mycobacterium leprae in clinical samples

Leprosy, a progressive, mutilating and highly stigmatized disease caused by Mycobacterium leprae (ML), continues to prevail in the developing world. This is due to the absence of rapid, specific and sensitive diagnostic tools for its early detection since the disease gets notified only with the adve...

Descripción completa

Detalles Bibliográficos
Autores principales: Garg, Nupur, Sahu, Upasana, Kar, Sudeshna, Ahmad, Farhan J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8110778/
https://www.ncbi.nlm.nih.gov/pubmed/33972644
http://dx.doi.org/10.1038/s41598-021-89304-2
_version_ 1783690360509169664
author Garg, Nupur
Sahu, Upasana
Kar, Sudeshna
Ahmad, Farhan J.
author_facet Garg, Nupur
Sahu, Upasana
Kar, Sudeshna
Ahmad, Farhan J.
author_sort Garg, Nupur
collection PubMed
description Leprosy, a progressive, mutilating and highly stigmatized disease caused by Mycobacterium leprae (ML), continues to prevail in the developing world. This is due to the absence of rapid, specific and sensitive diagnostic tools for its early detection since the disease gets notified only with the advent of physical scarring in patients. This study reports the development of a Loop-mediated isothermal amplification (LAMP) technique for fast, sensitive and specific amplification of 16S rRNA gene of ML DNA for early detection of leprosy in resource-limited areas. Various parameters were optimized to obtain robust and reliable amplification of ML DNA. Blind clinical validation studies were performed which showed that this technique had complete concurrence with conventional techniques. Total absence of amplification of negative control DNA confirmed the specificity of this test. Various visual detection methods viz. colorimetric, turbidity differentiation and bridge flocculation were standardized to establish easy-to-read and rapid diagnosis. This technique eliminates the lack of accuracy and sensitivity in skin smear tests in patients and the requirement for expensive lab equipments and trained technicians. The technique holds promise for further expansion and has the potential to cater to the unmet needs of society for a cheap, highly-sensitive and robust rapid diagnosis of ML.
format Online
Article
Text
id pubmed-8110778
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-81107782021-05-12 Development of a Loop-mediated isothermal amplification (LAMP) technique for specific and early detection of Mycobacterium leprae in clinical samples Garg, Nupur Sahu, Upasana Kar, Sudeshna Ahmad, Farhan J. Sci Rep Article Leprosy, a progressive, mutilating and highly stigmatized disease caused by Mycobacterium leprae (ML), continues to prevail in the developing world. This is due to the absence of rapid, specific and sensitive diagnostic tools for its early detection since the disease gets notified only with the advent of physical scarring in patients. This study reports the development of a Loop-mediated isothermal amplification (LAMP) technique for fast, sensitive and specific amplification of 16S rRNA gene of ML DNA for early detection of leprosy in resource-limited areas. Various parameters were optimized to obtain robust and reliable amplification of ML DNA. Blind clinical validation studies were performed which showed that this technique had complete concurrence with conventional techniques. Total absence of amplification of negative control DNA confirmed the specificity of this test. Various visual detection methods viz. colorimetric, turbidity differentiation and bridge flocculation were standardized to establish easy-to-read and rapid diagnosis. This technique eliminates the lack of accuracy and sensitivity in skin smear tests in patients and the requirement for expensive lab equipments and trained technicians. The technique holds promise for further expansion and has the potential to cater to the unmet needs of society for a cheap, highly-sensitive and robust rapid diagnosis of ML. Nature Publishing Group UK 2021-05-10 /pmc/articles/PMC8110778/ /pubmed/33972644 http://dx.doi.org/10.1038/s41598-021-89304-2 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Garg, Nupur
Sahu, Upasana
Kar, Sudeshna
Ahmad, Farhan J.
Development of a Loop-mediated isothermal amplification (LAMP) technique for specific and early detection of Mycobacterium leprae in clinical samples
title Development of a Loop-mediated isothermal amplification (LAMP) technique for specific and early detection of Mycobacterium leprae in clinical samples
title_full Development of a Loop-mediated isothermal amplification (LAMP) technique for specific and early detection of Mycobacterium leprae in clinical samples
title_fullStr Development of a Loop-mediated isothermal amplification (LAMP) technique for specific and early detection of Mycobacterium leprae in clinical samples
title_full_unstemmed Development of a Loop-mediated isothermal amplification (LAMP) technique for specific and early detection of Mycobacterium leprae in clinical samples
title_short Development of a Loop-mediated isothermal amplification (LAMP) technique for specific and early detection of Mycobacterium leprae in clinical samples
title_sort development of a loop-mediated isothermal amplification (lamp) technique for specific and early detection of mycobacterium leprae in clinical samples
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8110778/
https://www.ncbi.nlm.nih.gov/pubmed/33972644
http://dx.doi.org/10.1038/s41598-021-89304-2
work_keys_str_mv AT gargnupur developmentofaloopmediatedisothermalamplificationlamptechniqueforspecificandearlydetectionofmycobacteriumlepraeinclinicalsamples
AT sahuupasana developmentofaloopmediatedisothermalamplificationlamptechniqueforspecificandearlydetectionofmycobacteriumlepraeinclinicalsamples
AT karsudeshna developmentofaloopmediatedisothermalamplificationlamptechniqueforspecificandearlydetectionofmycobacteriumlepraeinclinicalsamples
AT ahmadfarhanj developmentofaloopmediatedisothermalamplificationlamptechniqueforspecificandearlydetectionofmycobacteriumlepraeinclinicalsamples