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Antimicrobial susceptibility testing results from 13 hospitals in Viet Nam: VINARES 2016–2017
OBJECTIVE: To analyse data from 2016–17 from a hospital-based antimicrobial resistance surveillance with national coverage in a network of hospitals Viet Nam. METHODS: We analysed data from 13 hospitals, 3 less than the dataset from the 2012–13 period. Identification and antimicrobial susceptibility...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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BioMed Central
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8112055/ https://www.ncbi.nlm.nih.gov/pubmed/33971969 http://dx.doi.org/10.1186/s13756-021-00937-4 |
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author | Vu, Tien Viet Dung Choisy, Marc Do, Thi Thuy Nga Nguyen, Van Minh Hoang Campbell, James I. Le, Thi Hoi Nguyen, Vu Trung Wertheim, Heiman F. L. Pham, Ngoc Thach Nguyen, Van Kinh van Doorn, H. Rogier |
author_facet | Vu, Tien Viet Dung Choisy, Marc Do, Thi Thuy Nga Nguyen, Van Minh Hoang Campbell, James I. Le, Thi Hoi Nguyen, Vu Trung Wertheim, Heiman F. L. Pham, Ngoc Thach Nguyen, Van Kinh van Doorn, H. Rogier |
author_sort | Vu, Tien Viet Dung |
collection | PubMed |
description | OBJECTIVE: To analyse data from 2016–17 from a hospital-based antimicrobial resistance surveillance with national coverage in a network of hospitals Viet Nam. METHODS: We analysed data from 13 hospitals, 3 less than the dataset from the 2012–13 period. Identification and antimicrobial susceptibility testing data from the clinical microbiology laboratories from samples sent in for routine diagnostics were used. Clinical and Laboratory Standards Institute 2018 guidelines were used for antimicrobial susceptibility testing interpretation. WHONET was used for data entry, management and analysis. RESULTS: 42,553 deduplicated isolates were included in this analysis; including 30,222 (71%) Gram-negative and 12,331 (29%) Gram-positive bacteria. 8,793 (21%) were from ICUs and 7,439 (18%) isolates were from invasive infections. Escherichia coli and Staphylococcus aureus were the most frequently detected species with 9,092 (21%) and 4,833 isolates (11%), respectively; followed by Klebsiella pneumoniae (3,858 isolates – 9.1%) and Acinetobacter baumannii (3,870 isolates – 9%). Bacteria were mainly isolated from sputum (8,798 isolates – 21%), blood (7,118 isolates – 17%) and urine (5,202 isolates – 12%). Among Gram-positives 3,302/4,515 isolates (73%) of S. aureus were MRSA; 99/290 (34%) of Enterococcus faecium were resistant to vancomycin; and 58% (663/1,136) of Streptococcus pneumoniae proportion were reduced susceptible to penicillin. Among Gram-negatives 59% (4,085/6,953) and 40% (1,186/2,958) of E. coli and K. pneumoniae produced ESBL and 29% (376/1,298) and 11% (961/8,830) were resistant to carbapenems, respectively. 79% (2855/3622) and 45% (1,514/3,376) of Acinetobacter spp. and Pseudomonas aeruginosa were carbapenem resistant, respectively. 88% (804/911) of Haemophilus influenzae were ampicillin resistant and 18/253 (7%) of Salmonella spp. and 7/46 (15%) of Shigella spp. were resistant to fluoroquinolones. The number of isolates from which data were submitted in the 2016–2017 period was twice as high as in 2012–2013. AMR proportions were higher in 2016–2017 for most pathogen-antimicrobial combinations of interest including imipenem-resistant A. baumannii, P. aeruginosa and Enterobacterales. CONCLUSIONS: The data show alarmingly high and increasing resistant proportions among important organisms in Viet Nam. AMR proportions varied across hospital types and should be interpreted with caution because existing sampling bias and missing information on whether isolates were community or hospital acquired. Affordable and scalable ways to adopt a sample- or case-based approach across the network should be explored and clinical data should be integrated to help provide more accurate inferences of the surveillance data. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s13756-021-00937-4. |
format | Online Article Text |
id | pubmed-8112055 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-81120552021-05-12 Antimicrobial susceptibility testing results from 13 hospitals in Viet Nam: VINARES 2016–2017 Vu, Tien Viet Dung Choisy, Marc Do, Thi Thuy Nga Nguyen, Van Minh Hoang Campbell, James I. Le, Thi Hoi Nguyen, Vu Trung Wertheim, Heiman F. L. Pham, Ngoc Thach Nguyen, Van Kinh van Doorn, H. Rogier Antimicrob Resist Infect Control Research OBJECTIVE: To analyse data from 2016–17 from a hospital-based antimicrobial resistance surveillance with national coverage in a network of hospitals Viet Nam. METHODS: We analysed data from 13 hospitals, 3 less than the dataset from the 2012–13 period. Identification and antimicrobial susceptibility testing data from the clinical microbiology laboratories from samples sent in for routine diagnostics were used. Clinical and Laboratory Standards Institute 2018 guidelines were used for antimicrobial susceptibility testing interpretation. WHONET was used for data entry, management and analysis. RESULTS: 42,553 deduplicated isolates were included in this analysis; including 30,222 (71%) Gram-negative and 12,331 (29%) Gram-positive bacteria. 8,793 (21%) were from ICUs and 7,439 (18%) isolates were from invasive infections. Escherichia coli and Staphylococcus aureus were the most frequently detected species with 9,092 (21%) and 4,833 isolates (11%), respectively; followed by Klebsiella pneumoniae (3,858 isolates – 9.1%) and Acinetobacter baumannii (3,870 isolates – 9%). Bacteria were mainly isolated from sputum (8,798 isolates – 21%), blood (7,118 isolates – 17%) and urine (5,202 isolates – 12%). Among Gram-positives 3,302/4,515 isolates (73%) of S. aureus were MRSA; 99/290 (34%) of Enterococcus faecium were resistant to vancomycin; and 58% (663/1,136) of Streptococcus pneumoniae proportion were reduced susceptible to penicillin. Among Gram-negatives 59% (4,085/6,953) and 40% (1,186/2,958) of E. coli and K. pneumoniae produced ESBL and 29% (376/1,298) and 11% (961/8,830) were resistant to carbapenems, respectively. 79% (2855/3622) and 45% (1,514/3,376) of Acinetobacter spp. and Pseudomonas aeruginosa were carbapenem resistant, respectively. 88% (804/911) of Haemophilus influenzae were ampicillin resistant and 18/253 (7%) of Salmonella spp. and 7/46 (15%) of Shigella spp. were resistant to fluoroquinolones. The number of isolates from which data were submitted in the 2016–2017 period was twice as high as in 2012–2013. AMR proportions were higher in 2016–2017 for most pathogen-antimicrobial combinations of interest including imipenem-resistant A. baumannii, P. aeruginosa and Enterobacterales. CONCLUSIONS: The data show alarmingly high and increasing resistant proportions among important organisms in Viet Nam. AMR proportions varied across hospital types and should be interpreted with caution because existing sampling bias and missing information on whether isolates were community or hospital acquired. Affordable and scalable ways to adopt a sample- or case-based approach across the network should be explored and clinical data should be integrated to help provide more accurate inferences of the surveillance data. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s13756-021-00937-4. BioMed Central 2021-05-10 /pmc/articles/PMC8112055/ /pubmed/33971969 http://dx.doi.org/10.1186/s13756-021-00937-4 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Vu, Tien Viet Dung Choisy, Marc Do, Thi Thuy Nga Nguyen, Van Minh Hoang Campbell, James I. Le, Thi Hoi Nguyen, Vu Trung Wertheim, Heiman F. L. Pham, Ngoc Thach Nguyen, Van Kinh van Doorn, H. Rogier Antimicrobial susceptibility testing results from 13 hospitals in Viet Nam: VINARES 2016–2017 |
title | Antimicrobial susceptibility testing results from 13 hospitals in Viet Nam: VINARES 2016–2017 |
title_full | Antimicrobial susceptibility testing results from 13 hospitals in Viet Nam: VINARES 2016–2017 |
title_fullStr | Antimicrobial susceptibility testing results from 13 hospitals in Viet Nam: VINARES 2016–2017 |
title_full_unstemmed | Antimicrobial susceptibility testing results from 13 hospitals in Viet Nam: VINARES 2016–2017 |
title_short | Antimicrobial susceptibility testing results from 13 hospitals in Viet Nam: VINARES 2016–2017 |
title_sort | antimicrobial susceptibility testing results from 13 hospitals in viet nam: vinares 2016–2017 |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8112055/ https://www.ncbi.nlm.nih.gov/pubmed/33971969 http://dx.doi.org/10.1186/s13756-021-00937-4 |
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