Cargando…

New software tools, databases, and resources in metabolomics: updates from 2020

BACKGROUND: Precision medicine, space exploration, drug discovery to characterization of dark chemical space of habitats and organisms, metabolomics takes a centre stage in providing answers to diverse biological, biomedical, and environmental questions. With technological advances in mass-spectrome...

Descripción completa

Detalles Bibliográficos
Autor principal:	Misra, Biswapriya B.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Springer US 2021
Materias:	Review Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8112213/ https://www.ncbi.nlm.nih.gov/pubmed/33977389 http://dx.doi.org/10.1007/s11306-021-01796-1

Ejemplares similares

Metabolomic Responses of Guard Cells and Mesophyll Cells to Bicarbonate
por: Misra, Biswapriya B., et al.
Publicado: (2015)

Metabolomic Responses of Arabidopsis Suspension Cells to Bicarbonate under Light and Dark Conditions
por: Misra, Biswapriya B., et al.
Publicado: (2016)

Navigating freely-available software tools for metabolomics analysis
por: Spicer, Rachel, et al.
Publicado: (2017)

Plantmetabolomics.org: mass spectrometry-based Arabidopsis metabolomics—database and tools update
por: Bais, Preeti, et al.
Publicado: (2012)

Survey for Computer-Aided Tools and Databases in Metabolomics
por: Banimfreg, Bayan Hassan, et al.
Publicado: (2022)

The guard cell metabolome: functions in stomatal movement and global food security
por: Misra, Biswapriya B., et al.
Publicado: (2015)

Human Ageing Genomic Resources: new and updated databases
por: Tacutu, Robi, et al.
Publicado: (2018)

The Black-Box of Plant Apoplast Lipidomes
por: Misra, Biswapriya B.
Publicado: (2016)

The Chemical Exposome of Human Aging
por: Misra, Biswapriya B.
Publicado: (2020)

Software Tools and Approaches for Compound Identification of LC-MS/MS Data in Metabolomics
por: Blaženović, Ivana, et al.
Publicado: (2018)

Untargeted metabolomics in primary murine bone marrow stromal cells reveals distinct profile throughout osteoblast differentiation
por: Misra, Biswapriya B., et al.
Publicado: (2021)

The 2011 bioinformatics links directory update: more resources, tools and databases and features to empower the bioinformatics community
por: Brazas, Michelle D., et al.
Publicado: (2011)

Exploiting plant transcriptomic databases: Resources, tools, and approaches
por: Lim, Peng Ken, et al.
Publicado: (2022)

Culture of East Indian sandalwood tree somatic embryos in air-lift bioreactors for production of santalols, phenolics and arabinogalactan proteins
por: Misra, Biswapriya B., et al.
Publicado: (2013)

Concierge: Personal Database Software for Managing Digital Research Resources
por: Sakai, Hiroyuki, et al.
Publicado: (2007)

The Stanford Microarray Database: implementation of new analysis tools and open source release of software
por: Demeter, Janos, et al.
Publicado: (2007)

Cancer Metabolomics and the Human Metabolome Database
por: Wishart, David S., et al.
Publicado: (2016)

Update of the Diatom EST Database: a new tool for digital transcriptomics
por: Maheswari, Uma, et al.
Publicado: (2009)

CerealsDB—new tools for the analysis of the wheat genome: update 2020
por: Wilkinson, Paul A, et al.
Publicado: (2020)

Database Resources of the National Genomics Data Center in 2020
Publicado: (2020)

The Insect database in Dokdo, Korea: An updated version in 2020
por: Ryu, Jihun, et al.
Publicado: (2021)

An online database for plant image analysis software tools
por: Lobet, Guillaume, et al.
Publicado: (2013)

Database resources of the National Center for Biotechnology Information: update
por: Wheeler, David L., et al.
Publicado: (2004)

The bio.tools registry of software tools and data resources for the life sciences
por: Ison, Jon, et al.
Publicado: (2019)

MSCAT: A Machine Learning Assisted Catalog of Metabolomics Software Tools
por: Dekermanjian, Jonathan, et al.
Publicado: (2021)

Time-course analysis of Streptococcus sanguinis after manganese depletion reveals changes in glycolytic and nucleic acid metabolites
por: Puccio, Tanya, et al.
Publicado: (2021)

Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
por: Gonzalez-Galarza, Faviel F, et al.
Publicado: (2020)

Software testing 2020: preparing for new roles
por: Sharma, Mukesh
Publicado: (2016)

Promoting Early Assessment of Frailty in the New Normal: An Updated eFI-CGA Software Tool
por: Sepehri, Katayoun, et al.
Publicado: (2021)

State of the Field in Multi-Omics Research: From Computational Needs to Data Mining and Sharing
por: Krassowski, Michal, et al.
Publicado: (2020)

Metabolomics in Retinal Diseases: An Update
por: Li, Xing, et al.
Publicado: (2021)

The Biomolecular Interaction Network Database and related tools 2005 update
por: Alfarano, C., et al.
Publicado: (2005)

Current Resources for Evidence-Based Practice, November 2020
por: Bovbjerg, Marit L., et al.
Publicado: (2020)

Percutaneous cholecystostomy: An update for the 2020s
por: Karakas, Hakki Muammer, et al.
Publicado: (2021)

Integrated microbiome and metabolome analysis reveals a novel interplay between commensal bacteria and metabolites in colorectal cancer
por: Yang, Yongzhi, et al.
Publicado: (2019)

SorGSD: updating and expanding the sorghum genome science database with new contents and tools
por: Liu, Yuanming, et al.
Publicado: (2021)

MaizeGDB update: new tools, data and interface for the maize model organism database
por: Andorf, Carson M., et al.
Publicado: (2016)

2016 update of the PRIDE database and its related tools
por: Vizcaíno, Juan Antonio, et al.
Publicado: (2016)

2016 update of the PRIDE database and its related tools
por: Vizcaíno, Juan Antonio, et al.
Publicado: (2016)

GLIDA: GPCR—ligand database for chemical genomics drug discovery—database and tools update
por: Okuno, Yasushi, et al.
Publicado: (2008)

Cannot write session to /tmp/vufind_sessions/sess_9dbc4aovd52hq9p2kddsbn95d8