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Expansion of EasyClone-MarkerFree toolkit for Saccharomyces cerevisiae genome with new integration sites
Biotechnological production requires genetically stable recombinant strains. To ensure genomic stability, recombinant DNA is commonly integrated into the genome of the host strain. Multiple genetic tools have been developed for genomic integration into baker's yeast Saccharomyces cerevisiae. Pr...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8112480/ https://www.ncbi.nlm.nih.gov/pubmed/33893795 http://dx.doi.org/10.1093/femsyr/foab027 |
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author | Babaei, Mahsa Sartori, Luisa Karpukhin, Alexey Abashkin, Dmitrii Matrosova, Elena Borodina, Irina |
author_facet | Babaei, Mahsa Sartori, Luisa Karpukhin, Alexey Abashkin, Dmitrii Matrosova, Elena Borodina, Irina |
author_sort | Babaei, Mahsa |
collection | PubMed |
description | Biotechnological production requires genetically stable recombinant strains. To ensure genomic stability, recombinant DNA is commonly integrated into the genome of the host strain. Multiple genetic tools have been developed for genomic integration into baker's yeast Saccharomyces cerevisiae. Previously, we had developed a vector toolkit EasyClone-MarkerFree for stable integration into eleven sites on chromosomes X, XI, and XII of S. cerevisiae. The markerless integration was enabled by CRISPR-Cas9 system. In this study, we have expanded the kit with eight additional intergenic integration sites located on different chromosomes. The integration efficiency into the new sites was above 80%. The expression level of green fluorescence protein (gfp) for all eight sites was similar or above XI-2 site from the original EasyClone-MarkerFree toolkit. The cellular growth was not affected by the integration into any of the new eight locations. The eight-vector expansion kit is available from AddGene. |
format | Online Article Text |
id | pubmed-8112480 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-81124802021-05-13 Expansion of EasyClone-MarkerFree toolkit for Saccharomyces cerevisiae genome with new integration sites Babaei, Mahsa Sartori, Luisa Karpukhin, Alexey Abashkin, Dmitrii Matrosova, Elena Borodina, Irina FEMS Yeast Res Protocol Biotechnological production requires genetically stable recombinant strains. To ensure genomic stability, recombinant DNA is commonly integrated into the genome of the host strain. Multiple genetic tools have been developed for genomic integration into baker's yeast Saccharomyces cerevisiae. Previously, we had developed a vector toolkit EasyClone-MarkerFree for stable integration into eleven sites on chromosomes X, XI, and XII of S. cerevisiae. The markerless integration was enabled by CRISPR-Cas9 system. In this study, we have expanded the kit with eight additional intergenic integration sites located on different chromosomes. The integration efficiency into the new sites was above 80%. The expression level of green fluorescence protein (gfp) for all eight sites was similar or above XI-2 site from the original EasyClone-MarkerFree toolkit. The cellular growth was not affected by the integration into any of the new eight locations. The eight-vector expansion kit is available from AddGene. Oxford University Press 2021-04-24 /pmc/articles/PMC8112480/ /pubmed/33893795 http://dx.doi.org/10.1093/femsyr/foab027 Text en © The Author(s) 2021. Published by Oxford University Press on behalf of FEMS. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Protocol Babaei, Mahsa Sartori, Luisa Karpukhin, Alexey Abashkin, Dmitrii Matrosova, Elena Borodina, Irina Expansion of EasyClone-MarkerFree toolkit for Saccharomyces cerevisiae genome with new integration sites |
title | Expansion of EasyClone-MarkerFree toolkit for Saccharomyces cerevisiae genome with new integration sites |
title_full | Expansion of EasyClone-MarkerFree toolkit for Saccharomyces cerevisiae genome with new integration sites |
title_fullStr | Expansion of EasyClone-MarkerFree toolkit for Saccharomyces cerevisiae genome with new integration sites |
title_full_unstemmed | Expansion of EasyClone-MarkerFree toolkit for Saccharomyces cerevisiae genome with new integration sites |
title_short | Expansion of EasyClone-MarkerFree toolkit for Saccharomyces cerevisiae genome with new integration sites |
title_sort | expansion of easyclone-markerfree toolkit for saccharomyces cerevisiae genome with new integration sites |
topic | Protocol |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8112480/ https://www.ncbi.nlm.nih.gov/pubmed/33893795 http://dx.doi.org/10.1093/femsyr/foab027 |
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