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Genome-Wide Association Study Meta-Analysis for Parkinson Disease Motor Subtypes
OBJECTIVE: To discover genetic determinants of Parkinson disease (PD) motor subtypes, including tremor dominant (TD) and postural instability/gait difficulty (PIGD) forms. METHODS: In 3,212 PD cases of European ancestry, we performed a genome-wide association study (GWAS) examining 2 complementary o...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Wolters Kluwer
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8112852/ https://www.ncbi.nlm.nih.gov/pubmed/33987465 http://dx.doi.org/10.1212/NXG.0000000000000557 |
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author | Alfradique-Dunham, Isabel Al-Ouran, Rami von Coelln, Rainer Blauwendraat, Cornelis Hill, Emily Luo, Lan Stillwell, Amanda Young, Emily Kaw, Anita Tan, Manuela Liao, Calwing Hernandez, Dena Pihlstrom, Lasse Grosset, Donald Shulman, Lisa M. Liu, Zhandong Rouleau, Guy A. Nalls, Mike Singleton, Andrew B. Morris, Huw Jankovic, Joseph Shulman, Joshua M. |
author_facet | Alfradique-Dunham, Isabel Al-Ouran, Rami von Coelln, Rainer Blauwendraat, Cornelis Hill, Emily Luo, Lan Stillwell, Amanda Young, Emily Kaw, Anita Tan, Manuela Liao, Calwing Hernandez, Dena Pihlstrom, Lasse Grosset, Donald Shulman, Lisa M. Liu, Zhandong Rouleau, Guy A. Nalls, Mike Singleton, Andrew B. Morris, Huw Jankovic, Joseph Shulman, Joshua M. |
author_sort | Alfradique-Dunham, Isabel |
collection | PubMed |
description | OBJECTIVE: To discover genetic determinants of Parkinson disease (PD) motor subtypes, including tremor dominant (TD) and postural instability/gait difficulty (PIGD) forms. METHODS: In 3,212 PD cases of European ancestry, we performed a genome-wide association study (GWAS) examining 2 complementary outcome traits derived from the Unified Parkinson's Disease Rating Scale, including dichotomous motor subtype (TD vs PIGD) or a continuous tremor/PIGD score ratio. Logistic or linear regression models were adjusted for sex, age at onset, disease duration, and 5 ancestry principal components, followed by meta-analysis. RESULTS: Among 71 established PD risk variants, we detected multiple suggestive associations with PD motor subtype, including GPNMB (rs199351, p(subtype) = 0.01, p(ratio) = 0.03), SH3GL2 (rs10756907, p(subtype) = 0.02, p(ratio) = 0.01), HIP1R (rs10847864, p(subtype) = 0.02), RIT2 (rs12456492, p(subtype) = 0.02), and FBRSL1 (rs11610045, p(subtype) = 0.02). A PD genetic risk score integrating all 71 PD risk variants was also associated with subtype ratio (p = 0.026, ß = −0.04, 95% confidence interval = −0.07–0). Based on top results of our GWAS, we identify a novel suggestive association at the STK32B locus (rs2301857, p(ratio) = 6.6 × 10(−7)), which harbors an independent risk allele for essential tremor. CONCLUSIONS: Multiple PD risk alleles may also modify clinical manifestations to influence PD motor subtype. The discovery of a novel variant at STK32B suggests a possible overlap between genetic risk for essential tremor and tremor-dominant PD. |
format | Online Article Text |
id | pubmed-8112852 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Wolters Kluwer |
record_format | MEDLINE/PubMed |
spelling | pubmed-81128522021-05-12 Genome-Wide Association Study Meta-Analysis for Parkinson Disease Motor Subtypes Alfradique-Dunham, Isabel Al-Ouran, Rami von Coelln, Rainer Blauwendraat, Cornelis Hill, Emily Luo, Lan Stillwell, Amanda Young, Emily Kaw, Anita Tan, Manuela Liao, Calwing Hernandez, Dena Pihlstrom, Lasse Grosset, Donald Shulman, Lisa M. Liu, Zhandong Rouleau, Guy A. Nalls, Mike Singleton, Andrew B. Morris, Huw Jankovic, Joseph Shulman, Joshua M. Neurol Genet Article OBJECTIVE: To discover genetic determinants of Parkinson disease (PD) motor subtypes, including tremor dominant (TD) and postural instability/gait difficulty (PIGD) forms. METHODS: In 3,212 PD cases of European ancestry, we performed a genome-wide association study (GWAS) examining 2 complementary outcome traits derived from the Unified Parkinson's Disease Rating Scale, including dichotomous motor subtype (TD vs PIGD) or a continuous tremor/PIGD score ratio. Logistic or linear regression models were adjusted for sex, age at onset, disease duration, and 5 ancestry principal components, followed by meta-analysis. RESULTS: Among 71 established PD risk variants, we detected multiple suggestive associations with PD motor subtype, including GPNMB (rs199351, p(subtype) = 0.01, p(ratio) = 0.03), SH3GL2 (rs10756907, p(subtype) = 0.02, p(ratio) = 0.01), HIP1R (rs10847864, p(subtype) = 0.02), RIT2 (rs12456492, p(subtype) = 0.02), and FBRSL1 (rs11610045, p(subtype) = 0.02). A PD genetic risk score integrating all 71 PD risk variants was also associated with subtype ratio (p = 0.026, ß = −0.04, 95% confidence interval = −0.07–0). Based on top results of our GWAS, we identify a novel suggestive association at the STK32B locus (rs2301857, p(ratio) = 6.6 × 10(−7)), which harbors an independent risk allele for essential tremor. CONCLUSIONS: Multiple PD risk alleles may also modify clinical manifestations to influence PD motor subtype. The discovery of a novel variant at STK32B suggests a possible overlap between genetic risk for essential tremor and tremor-dominant PD. Wolters Kluwer 2021-01-28 /pmc/articles/PMC8112852/ /pubmed/33987465 http://dx.doi.org/10.1212/NXG.0000000000000557 Text en Copyright © 2021 The Author(s). Published by Wolters Kluwer Health, Inc. on behalf of the American Academy of Neurology. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivatives License 4.0 (CC BY-NC-ND) (https://creativecommons.org/licenses/by-nc-nd/4.0/) , which permits downloading and sharing the work provided it is properly cited. The work cannot be changed in any way or used commercially without permission from the journal. |
spellingShingle | Article Alfradique-Dunham, Isabel Al-Ouran, Rami von Coelln, Rainer Blauwendraat, Cornelis Hill, Emily Luo, Lan Stillwell, Amanda Young, Emily Kaw, Anita Tan, Manuela Liao, Calwing Hernandez, Dena Pihlstrom, Lasse Grosset, Donald Shulman, Lisa M. Liu, Zhandong Rouleau, Guy A. Nalls, Mike Singleton, Andrew B. Morris, Huw Jankovic, Joseph Shulman, Joshua M. Genome-Wide Association Study Meta-Analysis for Parkinson Disease Motor Subtypes |
title | Genome-Wide Association Study Meta-Analysis for Parkinson Disease Motor Subtypes |
title_full | Genome-Wide Association Study Meta-Analysis for Parkinson Disease Motor Subtypes |
title_fullStr | Genome-Wide Association Study Meta-Analysis for Parkinson Disease Motor Subtypes |
title_full_unstemmed | Genome-Wide Association Study Meta-Analysis for Parkinson Disease Motor Subtypes |
title_short | Genome-Wide Association Study Meta-Analysis for Parkinson Disease Motor Subtypes |
title_sort | genome-wide association study meta-analysis for parkinson disease motor subtypes |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8112852/ https://www.ncbi.nlm.nih.gov/pubmed/33987465 http://dx.doi.org/10.1212/NXG.0000000000000557 |
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