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Win, Lose, or Tie: Mathematical Modeling of Ligand Competition at the Cell–Extracellular Matrix Interface

Integrin transmembrane proteins conduct mechanotransduction at the cell–extracellular matrix (ECM) interface. This process is central to cellular homeostasis and therefore is particularly important when designing instructive biomaterials and organoid culture systems. Previous studies suggest that fi...

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Autores principales: Karagöz, Zeynep, Geuens, Thomas, LaPointe, Vanessa L. S., van Griensven, Martijn, Carlier, Aurélie
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8117103/
https://www.ncbi.nlm.nih.gov/pubmed/33996781
http://dx.doi.org/10.3389/fbioe.2021.657244
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author Karagöz, Zeynep
Geuens, Thomas
LaPointe, Vanessa L. S.
van Griensven, Martijn
Carlier, Aurélie
author_facet Karagöz, Zeynep
Geuens, Thomas
LaPointe, Vanessa L. S.
van Griensven, Martijn
Carlier, Aurélie
author_sort Karagöz, Zeynep
collection PubMed
description Integrin transmembrane proteins conduct mechanotransduction at the cell–extracellular matrix (ECM) interface. This process is central to cellular homeostasis and therefore is particularly important when designing instructive biomaterials and organoid culture systems. Previous studies suggest that fine-tuning the ECM composition and mechanical properties can improve organoid development. Toward the bigger goal of fully functional organoid development, we hypothesize that resolving the dynamics of ECM–integrin interactions will be highly instructive. To this end, we developed a mathematical model that enabled us to simulate three main interactions, namely integrin activation, ligand binding, and integrin clustering. Different from previously published computational models, we account for the binding of more than one type of ligand to the integrin. This competition between ligands defines the fate of the system. We have demonstrated that an increase in the initial concentration of ligands does not ensure an increase in the steady state concentration of ligand-bound integrins. The ligand with higher binding rate occupies more integrins at the steady state than does the competing ligand. With cell type specific, quantitative input on integrin-ligand binding rates, this model can be used to develop instructive cell culture systems.
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spelling pubmed-81171032021-05-14 Win, Lose, or Tie: Mathematical Modeling of Ligand Competition at the Cell–Extracellular Matrix Interface Karagöz, Zeynep Geuens, Thomas LaPointe, Vanessa L. S. van Griensven, Martijn Carlier, Aurélie Front Bioeng Biotechnol Bioengineering and Biotechnology Integrin transmembrane proteins conduct mechanotransduction at the cell–extracellular matrix (ECM) interface. This process is central to cellular homeostasis and therefore is particularly important when designing instructive biomaterials and organoid culture systems. Previous studies suggest that fine-tuning the ECM composition and mechanical properties can improve organoid development. Toward the bigger goal of fully functional organoid development, we hypothesize that resolving the dynamics of ECM–integrin interactions will be highly instructive. To this end, we developed a mathematical model that enabled us to simulate three main interactions, namely integrin activation, ligand binding, and integrin clustering. Different from previously published computational models, we account for the binding of more than one type of ligand to the integrin. This competition between ligands defines the fate of the system. We have demonstrated that an increase in the initial concentration of ligands does not ensure an increase in the steady state concentration of ligand-bound integrins. The ligand with higher binding rate occupies more integrins at the steady state than does the competing ligand. With cell type specific, quantitative input on integrin-ligand binding rates, this model can be used to develop instructive cell culture systems. Frontiers Media S.A. 2021-04-29 /pmc/articles/PMC8117103/ /pubmed/33996781 http://dx.doi.org/10.3389/fbioe.2021.657244 Text en Copyright © 2021 Karagöz, Geuens, LaPointe, van Griensven and Carlier. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Bioengineering and Biotechnology
Karagöz, Zeynep
Geuens, Thomas
LaPointe, Vanessa L. S.
van Griensven, Martijn
Carlier, Aurélie
Win, Lose, or Tie: Mathematical Modeling of Ligand Competition at the Cell–Extracellular Matrix Interface
title Win, Lose, or Tie: Mathematical Modeling of Ligand Competition at the Cell–Extracellular Matrix Interface
title_full Win, Lose, or Tie: Mathematical Modeling of Ligand Competition at the Cell–Extracellular Matrix Interface
title_fullStr Win, Lose, or Tie: Mathematical Modeling of Ligand Competition at the Cell–Extracellular Matrix Interface
title_full_unstemmed Win, Lose, or Tie: Mathematical Modeling of Ligand Competition at the Cell–Extracellular Matrix Interface
title_short Win, Lose, or Tie: Mathematical Modeling of Ligand Competition at the Cell–Extracellular Matrix Interface
title_sort win, lose, or tie: mathematical modeling of ligand competition at the cell–extracellular matrix interface
topic Bioengineering and Biotechnology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8117103/
https://www.ncbi.nlm.nih.gov/pubmed/33996781
http://dx.doi.org/10.3389/fbioe.2021.657244
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