The complete mitogenome and phylogenetic analysis of Indian driftfish, Cubiceps squamiceps (Scombriformes: Nomeidae)

The Indian driftfish (Cubiceps squamiceps) is one of the most important commercial fish species in China, Japan and India. The complete mitogenome of Cubiceps squamiceps was determined in this study. The assembled mitogenome was 16,507 bp and consisted of 13 protein-coding genes, 22 tRNAs, two rRNAs...

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Autores principales: Peng, Ying, Li, Jiasheng, Zhang, Kun, Liu, Yifan, Wang, Hongqiang, Li, Xuepeng, Zhang, Hua, Liu, Bingjian, Tian, Kuo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8118399/
https://www.ncbi.nlm.nih.gov/pubmed/34027068
http://dx.doi.org/10.1080/23802359.2021.1914235
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author Peng, Ying
Li, Jiasheng
Zhang, Kun
Liu, Yifan
Wang, Hongqiang
Li, Xuepeng
Zhang, Hua
Liu, Bingjian
Tian, Kuo
author_facet Peng, Ying
Li, Jiasheng
Zhang, Kun
Liu, Yifan
Wang, Hongqiang
Li, Xuepeng
Zhang, Hua
Liu, Bingjian
Tian, Kuo
author_sort Peng, Ying
collection PubMed
description The Indian driftfish (Cubiceps squamiceps) is one of the most important commercial fish species in China, Japan and India. The complete mitogenome of Cubiceps squamiceps was determined in this study. The assembled mitogenome was 16,507 bp and consisted of 13 protein-coding genes, 22 tRNAs, two rRNAs, and a control region. Nucleotide composition of the complete mitogenome was 27.5% A, 28.5% C, 17.5% G, and 26.5% T, with an A + T bias of 53.9%. The maximum-likelihood tree based on 13 protein-coding genes showed that Cubiceps pauciradiatus and Psenes pellucidus were the closest to C. squamiceps.
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spelling pubmed-81183992021-05-21 The complete mitogenome and phylogenetic analysis of Indian driftfish, Cubiceps squamiceps (Scombriformes: Nomeidae) Peng, Ying Li, Jiasheng Zhang, Kun Liu, Yifan Wang, Hongqiang Li, Xuepeng Zhang, Hua Liu, Bingjian Tian, Kuo Mitochondrial DNA B Resour Mitogenome Announcement The Indian driftfish (Cubiceps squamiceps) is one of the most important commercial fish species in China, Japan and India. The complete mitogenome of Cubiceps squamiceps was determined in this study. The assembled mitogenome was 16,507 bp and consisted of 13 protein-coding genes, 22 tRNAs, two rRNAs, and a control region. Nucleotide composition of the complete mitogenome was 27.5% A, 28.5% C, 17.5% G, and 26.5% T, with an A + T bias of 53.9%. The maximum-likelihood tree based on 13 protein-coding genes showed that Cubiceps pauciradiatus and Psenes pellucidus were the closest to C. squamiceps. Taylor & Francis 2021-05-10 /pmc/articles/PMC8118399/ /pubmed/34027068 http://dx.doi.org/10.1080/23802359.2021.1914235 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Peng, Ying
Li, Jiasheng
Zhang, Kun
Liu, Yifan
Wang, Hongqiang
Li, Xuepeng
Zhang, Hua
Liu, Bingjian
Tian, Kuo
The complete mitogenome and phylogenetic analysis of Indian driftfish, Cubiceps squamiceps (Scombriformes: Nomeidae)
title The complete mitogenome and phylogenetic analysis of Indian driftfish, Cubiceps squamiceps (Scombriformes: Nomeidae)
title_full The complete mitogenome and phylogenetic analysis of Indian driftfish, Cubiceps squamiceps (Scombriformes: Nomeidae)
title_fullStr The complete mitogenome and phylogenetic analysis of Indian driftfish, Cubiceps squamiceps (Scombriformes: Nomeidae)
title_full_unstemmed The complete mitogenome and phylogenetic analysis of Indian driftfish, Cubiceps squamiceps (Scombriformes: Nomeidae)
title_short The complete mitogenome and phylogenetic analysis of Indian driftfish, Cubiceps squamiceps (Scombriformes: Nomeidae)
title_sort complete mitogenome and phylogenetic analysis of indian driftfish, cubiceps squamiceps (scombriformes: nomeidae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8118399/
https://www.ncbi.nlm.nih.gov/pubmed/34027068
http://dx.doi.org/10.1080/23802359.2021.1914235
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