Cargando…

Identification of Novel Gene Signature Associated with Cell Glycolysis to Predict Survival in Hepatocellular Carcinoma Patients

PURPOSE: As hepatocellular carcinoma (HCC) is a complex disease, it is hard to classify HCC with a specific biomarker. This study used data from TCGA to create a genetic signature for predicting the prognosis of HCC patients. METHODS: In a group of HCC patients (n = 424) from TCGA, mRNA profiling wa...

Descripción completa

Detalles Bibliográficos
Autores principales: Wang, Ming, Jiang, Feng, Wei, Ke, Mao, Erli, Yin, Guoyong, Wu, Chuyan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8118732/
https://www.ncbi.nlm.nih.gov/pubmed/34035809
http://dx.doi.org/10.1155/2021/5564525
_version_ 1783691808225624064
author Wang, Ming
Jiang, Feng
Wei, Ke
Mao, Erli
Yin, Guoyong
Wu, Chuyan
author_facet Wang, Ming
Jiang, Feng
Wei, Ke
Mao, Erli
Yin, Guoyong
Wu, Chuyan
author_sort Wang, Ming
collection PubMed
description PURPOSE: As hepatocellular carcinoma (HCC) is a complex disease, it is hard to classify HCC with a specific biomarker. This study used data from TCGA to create a genetic signature for predicting the prognosis of HCC patients. METHODS: In a group of HCC patients (n = 424) from TCGA, mRNA profiling was carried out. To recognize gene sets that differed significantly between HCC and normal tissues, an enrichment study of genes was carried out. Cox relative hazard regression models have been used to identify genes that are significantly associated with overall survival. To test the function of a prognostic risk parameter, the following multivariate Cox regression analysis was used. The log-rank test and Kaplan–Meier survival estimates were used to test the significance of risk parameters for predictive prognoses. RESULTS: Eight genes have been identified as having a significant link to overall survival (PAM, NUP155, GOT2, KDELR3, PKM, NSDHL, ENO1, and SRD5A3). The 377 HCC patients were divided into eight-gene signature-based high/low-risk subgroups. The eight-gene signature's prognostic ability was unaffected by a number of factors. CONCLUSION: To predict the survival of patients with HCC, an eight-gene signature associated with cellular glycolysis was then identified. The findings shed light on cellular glycolysis processes and the diagnosis of patients with low HCC prognoses.
format Online
Article
Text
id pubmed-8118732
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Hindawi
record_format MEDLINE/PubMed
spelling pubmed-81187322021-05-24 Identification of Novel Gene Signature Associated with Cell Glycolysis to Predict Survival in Hepatocellular Carcinoma Patients Wang, Ming Jiang, Feng Wei, Ke Mao, Erli Yin, Guoyong Wu, Chuyan J Oncol Research Article PURPOSE: As hepatocellular carcinoma (HCC) is a complex disease, it is hard to classify HCC with a specific biomarker. This study used data from TCGA to create a genetic signature for predicting the prognosis of HCC patients. METHODS: In a group of HCC patients (n = 424) from TCGA, mRNA profiling was carried out. To recognize gene sets that differed significantly between HCC and normal tissues, an enrichment study of genes was carried out. Cox relative hazard regression models have been used to identify genes that are significantly associated with overall survival. To test the function of a prognostic risk parameter, the following multivariate Cox regression analysis was used. The log-rank test and Kaplan–Meier survival estimates were used to test the significance of risk parameters for predictive prognoses. RESULTS: Eight genes have been identified as having a significant link to overall survival (PAM, NUP155, GOT2, KDELR3, PKM, NSDHL, ENO1, and SRD5A3). The 377 HCC patients were divided into eight-gene signature-based high/low-risk subgroups. The eight-gene signature's prognostic ability was unaffected by a number of factors. CONCLUSION: To predict the survival of patients with HCC, an eight-gene signature associated with cellular glycolysis was then identified. The findings shed light on cellular glycolysis processes and the diagnosis of patients with low HCC prognoses. Hindawi 2021-05-06 /pmc/articles/PMC8118732/ /pubmed/34035809 http://dx.doi.org/10.1155/2021/5564525 Text en Copyright © 2021 Ming Wang et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Wang, Ming
Jiang, Feng
Wei, Ke
Mao, Erli
Yin, Guoyong
Wu, Chuyan
Identification of Novel Gene Signature Associated with Cell Glycolysis to Predict Survival in Hepatocellular Carcinoma Patients
title Identification of Novel Gene Signature Associated with Cell Glycolysis to Predict Survival in Hepatocellular Carcinoma Patients
title_full Identification of Novel Gene Signature Associated with Cell Glycolysis to Predict Survival in Hepatocellular Carcinoma Patients
title_fullStr Identification of Novel Gene Signature Associated with Cell Glycolysis to Predict Survival in Hepatocellular Carcinoma Patients
title_full_unstemmed Identification of Novel Gene Signature Associated with Cell Glycolysis to Predict Survival in Hepatocellular Carcinoma Patients
title_short Identification of Novel Gene Signature Associated with Cell Glycolysis to Predict Survival in Hepatocellular Carcinoma Patients
title_sort identification of novel gene signature associated with cell glycolysis to predict survival in hepatocellular carcinoma patients
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8118732/
https://www.ncbi.nlm.nih.gov/pubmed/34035809
http://dx.doi.org/10.1155/2021/5564525
work_keys_str_mv AT wangming identificationofnovelgenesignatureassociatedwithcellglycolysistopredictsurvivalinhepatocellularcarcinomapatients
AT jiangfeng identificationofnovelgenesignatureassociatedwithcellglycolysistopredictsurvivalinhepatocellularcarcinomapatients
AT weike identificationofnovelgenesignatureassociatedwithcellglycolysistopredictsurvivalinhepatocellularcarcinomapatients
AT maoerli identificationofnovelgenesignatureassociatedwithcellglycolysistopredictsurvivalinhepatocellularcarcinomapatients
AT yinguoyong identificationofnovelgenesignatureassociatedwithcellglycolysistopredictsurvivalinhepatocellularcarcinomapatients
AT wuchuyan identificationofnovelgenesignatureassociatedwithcellglycolysistopredictsurvivalinhepatocellularcarcinomapatients