Cargando…
Identification of Novel Gene Signature Associated with Cell Glycolysis to Predict Survival in Hepatocellular Carcinoma Patients
PURPOSE: As hepatocellular carcinoma (HCC) is a complex disease, it is hard to classify HCC with a specific biomarker. This study used data from TCGA to create a genetic signature for predicting the prognosis of HCC patients. METHODS: In a group of HCC patients (n = 424) from TCGA, mRNA profiling wa...
Autores principales: | , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8118732/ https://www.ncbi.nlm.nih.gov/pubmed/34035809 http://dx.doi.org/10.1155/2021/5564525 |
_version_ | 1783691808225624064 |
---|---|
author | Wang, Ming Jiang, Feng Wei, Ke Mao, Erli Yin, Guoyong Wu, Chuyan |
author_facet | Wang, Ming Jiang, Feng Wei, Ke Mao, Erli Yin, Guoyong Wu, Chuyan |
author_sort | Wang, Ming |
collection | PubMed |
description | PURPOSE: As hepatocellular carcinoma (HCC) is a complex disease, it is hard to classify HCC with a specific biomarker. This study used data from TCGA to create a genetic signature for predicting the prognosis of HCC patients. METHODS: In a group of HCC patients (n = 424) from TCGA, mRNA profiling was carried out. To recognize gene sets that differed significantly between HCC and normal tissues, an enrichment study of genes was carried out. Cox relative hazard regression models have been used to identify genes that are significantly associated with overall survival. To test the function of a prognostic risk parameter, the following multivariate Cox regression analysis was used. The log-rank test and Kaplan–Meier survival estimates were used to test the significance of risk parameters for predictive prognoses. RESULTS: Eight genes have been identified as having a significant link to overall survival (PAM, NUP155, GOT2, KDELR3, PKM, NSDHL, ENO1, and SRD5A3). The 377 HCC patients were divided into eight-gene signature-based high/low-risk subgroups. The eight-gene signature's prognostic ability was unaffected by a number of factors. CONCLUSION: To predict the survival of patients with HCC, an eight-gene signature associated with cellular glycolysis was then identified. The findings shed light on cellular glycolysis processes and the diagnosis of patients with low HCC prognoses. |
format | Online Article Text |
id | pubmed-8118732 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Hindawi |
record_format | MEDLINE/PubMed |
spelling | pubmed-81187322021-05-24 Identification of Novel Gene Signature Associated with Cell Glycolysis to Predict Survival in Hepatocellular Carcinoma Patients Wang, Ming Jiang, Feng Wei, Ke Mao, Erli Yin, Guoyong Wu, Chuyan J Oncol Research Article PURPOSE: As hepatocellular carcinoma (HCC) is a complex disease, it is hard to classify HCC with a specific biomarker. This study used data from TCGA to create a genetic signature for predicting the prognosis of HCC patients. METHODS: In a group of HCC patients (n = 424) from TCGA, mRNA profiling was carried out. To recognize gene sets that differed significantly between HCC and normal tissues, an enrichment study of genes was carried out. Cox relative hazard regression models have been used to identify genes that are significantly associated with overall survival. To test the function of a prognostic risk parameter, the following multivariate Cox regression analysis was used. The log-rank test and Kaplan–Meier survival estimates were used to test the significance of risk parameters for predictive prognoses. RESULTS: Eight genes have been identified as having a significant link to overall survival (PAM, NUP155, GOT2, KDELR3, PKM, NSDHL, ENO1, and SRD5A3). The 377 HCC patients were divided into eight-gene signature-based high/low-risk subgroups. The eight-gene signature's prognostic ability was unaffected by a number of factors. CONCLUSION: To predict the survival of patients with HCC, an eight-gene signature associated with cellular glycolysis was then identified. The findings shed light on cellular glycolysis processes and the diagnosis of patients with low HCC prognoses. Hindawi 2021-05-06 /pmc/articles/PMC8118732/ /pubmed/34035809 http://dx.doi.org/10.1155/2021/5564525 Text en Copyright © 2021 Ming Wang et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Wang, Ming Jiang, Feng Wei, Ke Mao, Erli Yin, Guoyong Wu, Chuyan Identification of Novel Gene Signature Associated with Cell Glycolysis to Predict Survival in Hepatocellular Carcinoma Patients |
title | Identification of Novel Gene Signature Associated with Cell Glycolysis to Predict Survival in Hepatocellular Carcinoma Patients |
title_full | Identification of Novel Gene Signature Associated with Cell Glycolysis to Predict Survival in Hepatocellular Carcinoma Patients |
title_fullStr | Identification of Novel Gene Signature Associated with Cell Glycolysis to Predict Survival in Hepatocellular Carcinoma Patients |
title_full_unstemmed | Identification of Novel Gene Signature Associated with Cell Glycolysis to Predict Survival in Hepatocellular Carcinoma Patients |
title_short | Identification of Novel Gene Signature Associated with Cell Glycolysis to Predict Survival in Hepatocellular Carcinoma Patients |
title_sort | identification of novel gene signature associated with cell glycolysis to predict survival in hepatocellular carcinoma patients |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8118732/ https://www.ncbi.nlm.nih.gov/pubmed/34035809 http://dx.doi.org/10.1155/2021/5564525 |
work_keys_str_mv | AT wangming identificationofnovelgenesignatureassociatedwithcellglycolysistopredictsurvivalinhepatocellularcarcinomapatients AT jiangfeng identificationofnovelgenesignatureassociatedwithcellglycolysistopredictsurvivalinhepatocellularcarcinomapatients AT weike identificationofnovelgenesignatureassociatedwithcellglycolysistopredictsurvivalinhepatocellularcarcinomapatients AT maoerli identificationofnovelgenesignatureassociatedwithcellglycolysistopredictsurvivalinhepatocellularcarcinomapatients AT yinguoyong identificationofnovelgenesignatureassociatedwithcellglycolysistopredictsurvivalinhepatocellularcarcinomapatients AT wuchuyan identificationofnovelgenesignatureassociatedwithcellglycolysistopredictsurvivalinhepatocellularcarcinomapatients |