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Aberrant functional connectivity and activity in Parkinson’s disease and comorbidity with depression based on radiomic analysis
INTRODUCTION: The current diagnosis of Parkinson's disease (PD) comorbidity with depression (DPD) largely depends on clinical evaluation. However, the modality may tend to lack precision in detecting PD with depression. A radiomic approach that combines functional connectivity and activity with...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8119873/ https://www.ncbi.nlm.nih.gov/pubmed/33694328 http://dx.doi.org/10.1002/brb3.2103 |
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author | Zhang, Xulian Cao, Xuan Xue, Chen Zheng, Jingyi Zhang, Shaojun Huang, Qingling Liu, Weiguo |
author_facet | Zhang, Xulian Cao, Xuan Xue, Chen Zheng, Jingyi Zhang, Shaojun Huang, Qingling Liu, Weiguo |
author_sort | Zhang, Xulian |
collection | PubMed |
description | INTRODUCTION: The current diagnosis of Parkinson's disease (PD) comorbidity with depression (DPD) largely depends on clinical evaluation. However, the modality may tend to lack precision in detecting PD with depression. A radiomic approach that combines functional connectivity and activity with clinical scores has the potential to achieve accurate and differential diagnosis between PD and DPD. METHODS: In this study, we aimed to employ the radiomic approach to extract large‐scale features of functional connectivity and activity for differentiating among DPD, PD with no depression (NDPD), and healthy controls (HC). We extracted 6,557 features of five types from all subjects including clinical characteristics, resting‐state functional connectivity (RSFC), amplitude of low‐frequency fluctuation (ALFF), regional homogeneity (ReHo), and voxel‐mirrored homotopic connectivity (VMHC). Lasso, random forest, and support vector machine (SVM) were implemented for feature selection and dimension reduction based on the training sets, and the prediction performance for different methods in the testing sets was compared. RESULTS: The results showed that nineteen features were selected for the group of DPD versus HC, 34 features were selected for the group of NDPD versus HC, and 17 features were retained for the group of DPD versus NDPD. In the testing sets, Lasso prediction achieved the accuracies of 0.95, 0.96, and 0.85 for distinguishing between DPD and HC, NDPD and HC, and DPD and NDPD, respectively. Random forest achieved the accuracies of 0.90, 0.82, and 0.90 for distinguishing between DPD and HC, NDPD and HC, and DPD and NDPD, respectively, while SVM yielded the accuracies of 1, 0.86 and 0.65 for distinguishing between DPD and HC, NDPD and HC, and DPD and NDPD, respectively. CONCLUSIONS: By identifying aberrant functional connectivity and activity as potential biomarkers, the radiomic approach facilitates a deeper understanding and provides new insights into the pathophysiology of DPD to support the clinical diagnosis with high prediction accuracy. |
format | Online Article Text |
id | pubmed-8119873 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-81198732021-05-21 Aberrant functional connectivity and activity in Parkinson’s disease and comorbidity with depression based on radiomic analysis Zhang, Xulian Cao, Xuan Xue, Chen Zheng, Jingyi Zhang, Shaojun Huang, Qingling Liu, Weiguo Brain Behav Original Research INTRODUCTION: The current diagnosis of Parkinson's disease (PD) comorbidity with depression (DPD) largely depends on clinical evaluation. However, the modality may tend to lack precision in detecting PD with depression. A radiomic approach that combines functional connectivity and activity with clinical scores has the potential to achieve accurate and differential diagnosis between PD and DPD. METHODS: In this study, we aimed to employ the radiomic approach to extract large‐scale features of functional connectivity and activity for differentiating among DPD, PD with no depression (NDPD), and healthy controls (HC). We extracted 6,557 features of five types from all subjects including clinical characteristics, resting‐state functional connectivity (RSFC), amplitude of low‐frequency fluctuation (ALFF), regional homogeneity (ReHo), and voxel‐mirrored homotopic connectivity (VMHC). Lasso, random forest, and support vector machine (SVM) were implemented for feature selection and dimension reduction based on the training sets, and the prediction performance for different methods in the testing sets was compared. RESULTS: The results showed that nineteen features were selected for the group of DPD versus HC, 34 features were selected for the group of NDPD versus HC, and 17 features were retained for the group of DPD versus NDPD. In the testing sets, Lasso prediction achieved the accuracies of 0.95, 0.96, and 0.85 for distinguishing between DPD and HC, NDPD and HC, and DPD and NDPD, respectively. Random forest achieved the accuracies of 0.90, 0.82, and 0.90 for distinguishing between DPD and HC, NDPD and HC, and DPD and NDPD, respectively, while SVM yielded the accuracies of 1, 0.86 and 0.65 for distinguishing between DPD and HC, NDPD and HC, and DPD and NDPD, respectively. CONCLUSIONS: By identifying aberrant functional connectivity and activity as potential biomarkers, the radiomic approach facilitates a deeper understanding and provides new insights into the pathophysiology of DPD to support the clinical diagnosis with high prediction accuracy. John Wiley and Sons Inc. 2021-03-10 /pmc/articles/PMC8119873/ /pubmed/33694328 http://dx.doi.org/10.1002/brb3.2103 Text en © 2021 The Authors. Brain and Behavior published by Wiley Periodicals LLC https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Research Zhang, Xulian Cao, Xuan Xue, Chen Zheng, Jingyi Zhang, Shaojun Huang, Qingling Liu, Weiguo Aberrant functional connectivity and activity in Parkinson’s disease and comorbidity with depression based on radiomic analysis |
title | Aberrant functional connectivity and activity in Parkinson’s disease and comorbidity with depression based on radiomic analysis |
title_full | Aberrant functional connectivity and activity in Parkinson’s disease and comorbidity with depression based on radiomic analysis |
title_fullStr | Aberrant functional connectivity and activity in Parkinson’s disease and comorbidity with depression based on radiomic analysis |
title_full_unstemmed | Aberrant functional connectivity and activity in Parkinson’s disease and comorbidity with depression based on radiomic analysis |
title_short | Aberrant functional connectivity and activity in Parkinson’s disease and comorbidity with depression based on radiomic analysis |
title_sort | aberrant functional connectivity and activity in parkinson’s disease and comorbidity with depression based on radiomic analysis |
topic | Original Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8119873/ https://www.ncbi.nlm.nih.gov/pubmed/33694328 http://dx.doi.org/10.1002/brb3.2103 |
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