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Cellular connectomes as arbiters of local circuit models in the cerebral cortex
With the availability of cellular-resolution connectivity maps, connectomes, from the mammalian nervous system, it is in question how informative such massive connectomic data can be for the distinction of local circuit models in the mammalian cerebral cortex. Here, we investigated whether cellular-...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8119988/ https://www.ncbi.nlm.nih.gov/pubmed/33986261 http://dx.doi.org/10.1038/s41467-021-22856-z |
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author | Klinger, Emmanuel Motta, Alessandro Marr, Carsten Theis, Fabian J. Helmstaedter, Moritz |
author_facet | Klinger, Emmanuel Motta, Alessandro Marr, Carsten Theis, Fabian J. Helmstaedter, Moritz |
author_sort | Klinger, Emmanuel |
collection | PubMed |
description | With the availability of cellular-resolution connectivity maps, connectomes, from the mammalian nervous system, it is in question how informative such massive connectomic data can be for the distinction of local circuit models in the mammalian cerebral cortex. Here, we investigated whether cellular-resolution connectomic data can in principle allow model discrimination for local circuit modules in layer 4 of mouse primary somatosensory cortex. We used approximate Bayesian model selection based on a set of simple connectome statistics to compute the posterior probability over proposed models given a to-be-measured connectome. We find that the distinction of the investigated local cortical models is faithfully possible based on purely structural connectomic data with an accuracy of more than 90%, and that such distinction is stable against substantial errors in the connectome measurement. Furthermore, mapping a fraction of only 10% of the local connectome is sufficient for connectome-based model distinction under realistic experimental constraints. Together, these results show for a concrete local circuit example that connectomic data allows model selection in the cerebral cortex and define the experimental strategy for obtaining such connectomic data. |
format | Online Article Text |
id | pubmed-8119988 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-81199882021-05-18 Cellular connectomes as arbiters of local circuit models in the cerebral cortex Klinger, Emmanuel Motta, Alessandro Marr, Carsten Theis, Fabian J. Helmstaedter, Moritz Nat Commun Article With the availability of cellular-resolution connectivity maps, connectomes, from the mammalian nervous system, it is in question how informative such massive connectomic data can be for the distinction of local circuit models in the mammalian cerebral cortex. Here, we investigated whether cellular-resolution connectomic data can in principle allow model discrimination for local circuit modules in layer 4 of mouse primary somatosensory cortex. We used approximate Bayesian model selection based on a set of simple connectome statistics to compute the posterior probability over proposed models given a to-be-measured connectome. We find that the distinction of the investigated local cortical models is faithfully possible based on purely structural connectomic data with an accuracy of more than 90%, and that such distinction is stable against substantial errors in the connectome measurement. Furthermore, mapping a fraction of only 10% of the local connectome is sufficient for connectome-based model distinction under realistic experimental constraints. Together, these results show for a concrete local circuit example that connectomic data allows model selection in the cerebral cortex and define the experimental strategy for obtaining such connectomic data. Nature Publishing Group UK 2021-05-13 /pmc/articles/PMC8119988/ /pubmed/33986261 http://dx.doi.org/10.1038/s41467-021-22856-z Text en © The Author(s) 2021, corrected publication 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Klinger, Emmanuel Motta, Alessandro Marr, Carsten Theis, Fabian J. Helmstaedter, Moritz Cellular connectomes as arbiters of local circuit models in the cerebral cortex |
title | Cellular connectomes as arbiters of local circuit models in the cerebral cortex |
title_full | Cellular connectomes as arbiters of local circuit models in the cerebral cortex |
title_fullStr | Cellular connectomes as arbiters of local circuit models in the cerebral cortex |
title_full_unstemmed | Cellular connectomes as arbiters of local circuit models in the cerebral cortex |
title_short | Cellular connectomes as arbiters of local circuit models in the cerebral cortex |
title_sort | cellular connectomes as arbiters of local circuit models in the cerebral cortex |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8119988/ https://www.ncbi.nlm.nih.gov/pubmed/33986261 http://dx.doi.org/10.1038/s41467-021-22856-z |
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