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Detection of circRNA Biomarker for Acute Myocardial Infarction Based on System Biological Analysis of RNA Expression
Acute myocardial infarction (AMI) is myocardial necrosis caused by the persistent interruption of myocardial blood supply, which has high incidence rate and high mortality in middle-aged and elderly people in the worldwide. Biomarkers play an important role in the early diagnosis and treatment of AM...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8120315/ https://www.ncbi.nlm.nih.gov/pubmed/33995502 http://dx.doi.org/10.3389/fgene.2021.686116 |
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author | Yang, Wen Sun, Li Cao, Xun Li, Luyifei Zhang, Xin Li, Jianqian Zhao, Hongyan Zhan, Chengchuang Zang, Yanxiang Li, Tiankai Zhang, Li Liu, Guangzhong Li, Weimin |
author_facet | Yang, Wen Sun, Li Cao, Xun Li, Luyifei Zhang, Xin Li, Jianqian Zhao, Hongyan Zhan, Chengchuang Zang, Yanxiang Li, Tiankai Zhang, Li Liu, Guangzhong Li, Weimin |
author_sort | Yang, Wen |
collection | PubMed |
description | Acute myocardial infarction (AMI) is myocardial necrosis caused by the persistent interruption of myocardial blood supply, which has high incidence rate and high mortality in middle-aged and elderly people in the worldwide. Biomarkers play an important role in the early diagnosis and treatment of AMI. Recently, more and more researches confirmed that circRNA may be a potential diagnostic biomarker and therapeutic target for cardiovascular diseases. In this paper, a series of biological analyses were performed to find new effective circRNA biomarkers for AMI. Firstly, the expression levels of circRNAs in blood samples of patients with AMI and those with mild coronary stenosis were compared to reveal circRNAs which were involved in AMI. Then, circRNAs which were significant expressed abnormally in the blood samples of patients with AMI were selected from those circRNAs. Next, a ceRNA network was constructed based on interactions of circRNA, miRNA and mRNA through biological analyses to detect crucial circRNA associated with AMI. Finally, one circRNA was selected as candidate biomarker for AMI. To validate effectivity and efficiency of the candidate biomarker, fluorescence in situ hybridization, hypoxia model of human cardiomyocytes, and knockdown and overexpression analyses were performed on candidate circRNA biomarker. In conclusion, experimental results demonstrated that the candidate circRNA was an effective biomarker for diagnosis and therapy of AMI. |
format | Online Article Text |
id | pubmed-8120315 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-81203152021-05-15 Detection of circRNA Biomarker for Acute Myocardial Infarction Based on System Biological Analysis of RNA Expression Yang, Wen Sun, Li Cao, Xun Li, Luyifei Zhang, Xin Li, Jianqian Zhao, Hongyan Zhan, Chengchuang Zang, Yanxiang Li, Tiankai Zhang, Li Liu, Guangzhong Li, Weimin Front Genet Genetics Acute myocardial infarction (AMI) is myocardial necrosis caused by the persistent interruption of myocardial blood supply, which has high incidence rate and high mortality in middle-aged and elderly people in the worldwide. Biomarkers play an important role in the early diagnosis and treatment of AMI. Recently, more and more researches confirmed that circRNA may be a potential diagnostic biomarker and therapeutic target for cardiovascular diseases. In this paper, a series of biological analyses were performed to find new effective circRNA biomarkers for AMI. Firstly, the expression levels of circRNAs in blood samples of patients with AMI and those with mild coronary stenosis were compared to reveal circRNAs which were involved in AMI. Then, circRNAs which were significant expressed abnormally in the blood samples of patients with AMI were selected from those circRNAs. Next, a ceRNA network was constructed based on interactions of circRNA, miRNA and mRNA through biological analyses to detect crucial circRNA associated with AMI. Finally, one circRNA was selected as candidate biomarker for AMI. To validate effectivity and efficiency of the candidate biomarker, fluorescence in situ hybridization, hypoxia model of human cardiomyocytes, and knockdown and overexpression analyses were performed on candidate circRNA biomarker. In conclusion, experimental results demonstrated that the candidate circRNA was an effective biomarker for diagnosis and therapy of AMI. Frontiers Media S.A. 2021-04-30 /pmc/articles/PMC8120315/ /pubmed/33995502 http://dx.doi.org/10.3389/fgene.2021.686116 Text en Copyright © 2021 Yang, Sun, Cao, Li, Zhang, Li, Zhao, Zhan, Zang, Li, Zhang, Liu and Li. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Genetics Yang, Wen Sun, Li Cao, Xun Li, Luyifei Zhang, Xin Li, Jianqian Zhao, Hongyan Zhan, Chengchuang Zang, Yanxiang Li, Tiankai Zhang, Li Liu, Guangzhong Li, Weimin Detection of circRNA Biomarker for Acute Myocardial Infarction Based on System Biological Analysis of RNA Expression |
title | Detection of circRNA Biomarker for Acute Myocardial Infarction Based on System Biological Analysis of RNA Expression |
title_full | Detection of circRNA Biomarker for Acute Myocardial Infarction Based on System Biological Analysis of RNA Expression |
title_fullStr | Detection of circRNA Biomarker for Acute Myocardial Infarction Based on System Biological Analysis of RNA Expression |
title_full_unstemmed | Detection of circRNA Biomarker for Acute Myocardial Infarction Based on System Biological Analysis of RNA Expression |
title_short | Detection of circRNA Biomarker for Acute Myocardial Infarction Based on System Biological Analysis of RNA Expression |
title_sort | detection of circrna biomarker for acute myocardial infarction based on system biological analysis of rna expression |
topic | Genetics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8120315/ https://www.ncbi.nlm.nih.gov/pubmed/33995502 http://dx.doi.org/10.3389/fgene.2021.686116 |
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