Cargando…

Automatic segmentation of retinal layers in OCT images with intermediate age-related macular degeneration using U-Net and DexiNed

Age-related macular degeneration (AMD) is an eye disease that can cause visual impairment and affects the elderly over 50 years of age. AMD is characterized by the presence of drusen, which causes changes in the physiological structure of the retinal pigment epithelium (RPE) and the boundaries of th...

Descripción completa

Detalles Bibliográficos
Autores principales: Sousa, Jefferson Alves, Paiva, Anselmo, Silva, Aristófanes, Almeida, João Dallyson, Braz Junior, Geraldo, Diniz, João Otávio, Figueredo, Weslley Kelson, Gattass, Marcelo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8121340/
https://www.ncbi.nlm.nih.gov/pubmed/33989316
http://dx.doi.org/10.1371/journal.pone.0251591
_version_ 1783692321714339840
author Sousa, Jefferson Alves
Paiva, Anselmo
Silva, Aristófanes
Almeida, João Dallyson
Braz Junior, Geraldo
Diniz, João Otávio
Figueredo, Weslley Kelson
Gattass, Marcelo
author_facet Sousa, Jefferson Alves
Paiva, Anselmo
Silva, Aristófanes
Almeida, João Dallyson
Braz Junior, Geraldo
Diniz, João Otávio
Figueredo, Weslley Kelson
Gattass, Marcelo
author_sort Sousa, Jefferson Alves
collection PubMed
description Age-related macular degeneration (AMD) is an eye disease that can cause visual impairment and affects the elderly over 50 years of age. AMD is characterized by the presence of drusen, which causes changes in the physiological structure of the retinal pigment epithelium (RPE) and the boundaries of the Bruch’s membrane layer (BM). Optical coherence tomography is one of the main exams for the detection and monitoring of AMD, which seeks changes through the evaluation of successive sectional cuts in the search for morphological changes caused by drusen. The use of CAD (Computer-Aided Detection) systems has contributed to increasing the chances of correct detection, assisting specialists in diagnosing and monitoring disease. Thus, the objective of this work is to present a method for the segmentation of the inner limiting membrane (ILM), retinal pigment epithelium, and Bruch’s membrane in OCT images of healthy and Intermediate AMD patients. The method uses two deep neural networks, U-Net and DexiNed to perform the segmentation. The results were promising, reaching an average absolute error of 0.49 pixel for ILM, 0.57 for RPE, and 0.66 for BM.
format Online
Article
Text
id pubmed-8121340
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-81213402021-05-24 Automatic segmentation of retinal layers in OCT images with intermediate age-related macular degeneration using U-Net and DexiNed Sousa, Jefferson Alves Paiva, Anselmo Silva, Aristófanes Almeida, João Dallyson Braz Junior, Geraldo Diniz, João Otávio Figueredo, Weslley Kelson Gattass, Marcelo PLoS One Research Article Age-related macular degeneration (AMD) is an eye disease that can cause visual impairment and affects the elderly over 50 years of age. AMD is characterized by the presence of drusen, which causes changes in the physiological structure of the retinal pigment epithelium (RPE) and the boundaries of the Bruch’s membrane layer (BM). Optical coherence tomography is one of the main exams for the detection and monitoring of AMD, which seeks changes through the evaluation of successive sectional cuts in the search for morphological changes caused by drusen. The use of CAD (Computer-Aided Detection) systems has contributed to increasing the chances of correct detection, assisting specialists in diagnosing and monitoring disease. Thus, the objective of this work is to present a method for the segmentation of the inner limiting membrane (ILM), retinal pigment epithelium, and Bruch’s membrane in OCT images of healthy and Intermediate AMD patients. The method uses two deep neural networks, U-Net and DexiNed to perform the segmentation. The results were promising, reaching an average absolute error of 0.49 pixel for ILM, 0.57 for RPE, and 0.66 for BM. Public Library of Science 2021-05-14 /pmc/articles/PMC8121340/ /pubmed/33989316 http://dx.doi.org/10.1371/journal.pone.0251591 Text en © 2021 Sousa et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Sousa, Jefferson Alves
Paiva, Anselmo
Silva, Aristófanes
Almeida, João Dallyson
Braz Junior, Geraldo
Diniz, João Otávio
Figueredo, Weslley Kelson
Gattass, Marcelo
Automatic segmentation of retinal layers in OCT images with intermediate age-related macular degeneration using U-Net and DexiNed
title Automatic segmentation of retinal layers in OCT images with intermediate age-related macular degeneration using U-Net and DexiNed
title_full Automatic segmentation of retinal layers in OCT images with intermediate age-related macular degeneration using U-Net and DexiNed
title_fullStr Automatic segmentation of retinal layers in OCT images with intermediate age-related macular degeneration using U-Net and DexiNed
title_full_unstemmed Automatic segmentation of retinal layers in OCT images with intermediate age-related macular degeneration using U-Net and DexiNed
title_short Automatic segmentation of retinal layers in OCT images with intermediate age-related macular degeneration using U-Net and DexiNed
title_sort automatic segmentation of retinal layers in oct images with intermediate age-related macular degeneration using u-net and dexined
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8121340/
https://www.ncbi.nlm.nih.gov/pubmed/33989316
http://dx.doi.org/10.1371/journal.pone.0251591
work_keys_str_mv AT sousajeffersonalves automaticsegmentationofretinallayersinoctimageswithintermediateagerelatedmaculardegenerationusingunetanddexined
AT paivaanselmo automaticsegmentationofretinallayersinoctimageswithintermediateagerelatedmaculardegenerationusingunetanddexined
AT silvaaristofanes automaticsegmentationofretinallayersinoctimageswithintermediateagerelatedmaculardegenerationusingunetanddexined
AT almeidajoaodallyson automaticsegmentationofretinallayersinoctimageswithintermediateagerelatedmaculardegenerationusingunetanddexined
AT brazjuniorgeraldo automaticsegmentationofretinallayersinoctimageswithintermediateagerelatedmaculardegenerationusingunetanddexined
AT dinizjoaootavio automaticsegmentationofretinallayersinoctimageswithintermediateagerelatedmaculardegenerationusingunetanddexined
AT figueredoweslleykelson automaticsegmentationofretinallayersinoctimageswithintermediateagerelatedmaculardegenerationusingunetanddexined
AT gattassmarcelo automaticsegmentationofretinallayersinoctimageswithintermediateagerelatedmaculardegenerationusingunetanddexined