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Semi-Automated Data Processing and Semi-Supervised Machine Learning for the Detection and Classification of Water-Column Fish Schools and Gas Seeps with a Multibeam Echosounder †

Multibeam echosounders are widely used for 3D bathymetric mapping, and increasingly for water column studies. However, they rapidly collect huge volumes of data, which poses a challenge for water column data processing that is often still manual and time-consuming, or affected by low efficiency and...

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Autores principales: Minelli, Annalisa, Tassetti, Anna Nora, Hutton, Briony, Pezzuti Cozzolino, Gerardo N., Jarvis, Toby, Fabi, Gianna
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8123111/
https://www.ncbi.nlm.nih.gov/pubmed/33923343
http://dx.doi.org/10.3390/s21092999
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author Minelli, Annalisa
Tassetti, Anna Nora
Hutton, Briony
Pezzuti Cozzolino, Gerardo N.
Jarvis, Toby
Fabi, Gianna
author_facet Minelli, Annalisa
Tassetti, Anna Nora
Hutton, Briony
Pezzuti Cozzolino, Gerardo N.
Jarvis, Toby
Fabi, Gianna
author_sort Minelli, Annalisa
collection PubMed
description Multibeam echosounders are widely used for 3D bathymetric mapping, and increasingly for water column studies. However, they rapidly collect huge volumes of data, which poses a challenge for water column data processing that is often still manual and time-consuming, or affected by low efficiency and high false detection rates if automated. This research describes a comprehensive and reproducible workflow that improves efficiency and reliability of target detection and classification, by calculating metrics for target cross-sections using a commercial software before feeding into a feature-based semi-supervised machine learning framework. The method is tested with data collected from an uncalibrated multibeam echosounder around an offshore gas platform in the Adriatic Sea. It resulted in more-efficient target detection, and, although uncertainties regarding user labelled training data need to be underlined, an accuracy of 98% in target classification was reached by using a final pre-trained stacking ensemble model.
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spelling pubmed-81231112021-05-16 Semi-Automated Data Processing and Semi-Supervised Machine Learning for the Detection and Classification of Water-Column Fish Schools and Gas Seeps with a Multibeam Echosounder † Minelli, Annalisa Tassetti, Anna Nora Hutton, Briony Pezzuti Cozzolino, Gerardo N. Jarvis, Toby Fabi, Gianna Sensors (Basel) Article Multibeam echosounders are widely used for 3D bathymetric mapping, and increasingly for water column studies. However, they rapidly collect huge volumes of data, which poses a challenge for water column data processing that is often still manual and time-consuming, or affected by low efficiency and high false detection rates if automated. This research describes a comprehensive and reproducible workflow that improves efficiency and reliability of target detection and classification, by calculating metrics for target cross-sections using a commercial software before feeding into a feature-based semi-supervised machine learning framework. The method is tested with data collected from an uncalibrated multibeam echosounder around an offshore gas platform in the Adriatic Sea. It resulted in more-efficient target detection, and, although uncertainties regarding user labelled training data need to be underlined, an accuracy of 98% in target classification was reached by using a final pre-trained stacking ensemble model. MDPI 2021-04-24 /pmc/articles/PMC8123111/ /pubmed/33923343 http://dx.doi.org/10.3390/s21092999 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Minelli, Annalisa
Tassetti, Anna Nora
Hutton, Briony
Pezzuti Cozzolino, Gerardo N.
Jarvis, Toby
Fabi, Gianna
Semi-Automated Data Processing and Semi-Supervised Machine Learning for the Detection and Classification of Water-Column Fish Schools and Gas Seeps with a Multibeam Echosounder †
title Semi-Automated Data Processing and Semi-Supervised Machine Learning for the Detection and Classification of Water-Column Fish Schools and Gas Seeps with a Multibeam Echosounder †
title_full Semi-Automated Data Processing and Semi-Supervised Machine Learning for the Detection and Classification of Water-Column Fish Schools and Gas Seeps with a Multibeam Echosounder †
title_fullStr Semi-Automated Data Processing and Semi-Supervised Machine Learning for the Detection and Classification of Water-Column Fish Schools and Gas Seeps with a Multibeam Echosounder †
title_full_unstemmed Semi-Automated Data Processing and Semi-Supervised Machine Learning for the Detection and Classification of Water-Column Fish Schools and Gas Seeps with a Multibeam Echosounder †
title_short Semi-Automated Data Processing and Semi-Supervised Machine Learning for the Detection and Classification of Water-Column Fish Schools and Gas Seeps with a Multibeam Echosounder †
title_sort semi-automated data processing and semi-supervised machine learning for the detection and classification of water-column fish schools and gas seeps with a multibeam echosounder †
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8123111/
https://www.ncbi.nlm.nih.gov/pubmed/33923343
http://dx.doi.org/10.3390/s21092999
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