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Free Radical Isomerizations in Acetylene Bromoboration Reaction
The experimentally motivated question of the acetylene bromoboration mechanism was addressed in order to suggest possible radical isomerization pathways for the syn-adduct. Addition–elimination mechanisms starting with a bromine radical attack at the “bromine end” or the “boron end” of the C=C bond...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8123272/ https://www.ncbi.nlm.nih.gov/pubmed/33922945 http://dx.doi.org/10.3390/molecules26092501 |
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author | Semrád, Hugo Mazal, Ctibor Munzarová, Markéta |
author_facet | Semrád, Hugo Mazal, Ctibor Munzarová, Markéta |
author_sort | Semrád, Hugo |
collection | PubMed |
description | The experimentally motivated question of the acetylene bromoboration mechanism was addressed in order to suggest possible radical isomerization pathways for the syn-adduct. Addition–elimination mechanisms starting with a bromine radical attack at the “bromine end” or the “boron end” of the C=C bond were considered. Dispersion-corrected DFT and MP2 methods with the SMD solvation model were employed using three all-electron bases as well as the ECP28MWB ansatz. The rate-determining, elimination step had a higher activation energy (12 kcal mol(−1)) in case of the “bromine end” attack due to intermediate stabilization at both the MP2 and DFT levels. In case of the “boron end” attack, two modes of C–C bond rotation were followed and striking differences in MP2 vs. DFT potential energy surfaces were observed. Employing MP2, addition was followed by either a 180° rotation through an eclipsed conformation of vicinal bromine atoms or by an opposite rotation avoiding that conformation, with 5 kcal mol(−1) of elimination activation energy. Within B3LYP, the addition and rotation proceeded simultaneously, with a 9 (7) kcal mol(−1) barrier for rotation involving (avoiding) eclipsed conformation of vicinal bromines. For weakly bound complexes, ZPE corrections with MP2 revealed significant artifacts when diffuse bases were included, which must be considered in the Gibbs free energy profile interpretation. |
format | Online Article Text |
id | pubmed-8123272 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-81232722021-05-16 Free Radical Isomerizations in Acetylene Bromoboration Reaction Semrád, Hugo Mazal, Ctibor Munzarová, Markéta Molecules Article The experimentally motivated question of the acetylene bromoboration mechanism was addressed in order to suggest possible radical isomerization pathways for the syn-adduct. Addition–elimination mechanisms starting with a bromine radical attack at the “bromine end” or the “boron end” of the C=C bond were considered. Dispersion-corrected DFT and MP2 methods with the SMD solvation model were employed using three all-electron bases as well as the ECP28MWB ansatz. The rate-determining, elimination step had a higher activation energy (12 kcal mol(−1)) in case of the “bromine end” attack due to intermediate stabilization at both the MP2 and DFT levels. In case of the “boron end” attack, two modes of C–C bond rotation were followed and striking differences in MP2 vs. DFT potential energy surfaces were observed. Employing MP2, addition was followed by either a 180° rotation through an eclipsed conformation of vicinal bromine atoms or by an opposite rotation avoiding that conformation, with 5 kcal mol(−1) of elimination activation energy. Within B3LYP, the addition and rotation proceeded simultaneously, with a 9 (7) kcal mol(−1) barrier for rotation involving (avoiding) eclipsed conformation of vicinal bromines. For weakly bound complexes, ZPE corrections with MP2 revealed significant artifacts when diffuse bases were included, which must be considered in the Gibbs free energy profile interpretation. MDPI 2021-04-25 /pmc/articles/PMC8123272/ /pubmed/33922945 http://dx.doi.org/10.3390/molecules26092501 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Semrád, Hugo Mazal, Ctibor Munzarová, Markéta Free Radical Isomerizations in Acetylene Bromoboration Reaction |
title | Free Radical Isomerizations in Acetylene Bromoboration Reaction |
title_full | Free Radical Isomerizations in Acetylene Bromoboration Reaction |
title_fullStr | Free Radical Isomerizations in Acetylene Bromoboration Reaction |
title_full_unstemmed | Free Radical Isomerizations in Acetylene Bromoboration Reaction |
title_short | Free Radical Isomerizations in Acetylene Bromoboration Reaction |
title_sort | free radical isomerizations in acetylene bromoboration reaction |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8123272/ https://www.ncbi.nlm.nih.gov/pubmed/33922945 http://dx.doi.org/10.3390/molecules26092501 |
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