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Establishment of a prognostic model of four genes in gastric cancer based on multiple data sets

Gastric cancer (GC) is a kind of malignancy with a high mortality and recurrence. An effective prediction model based on ideal biomarkers to assess prognosis could benefit patients for optimization of treatment. Bioinformatics has played an increasingly important role in the study of cancer diseases...

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Autores principales: Zhou, Liqiang, Li, Shi H., Wu, You, Xin, Lin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8124107/
https://www.ncbi.nlm.nih.gov/pubmed/33934516
http://dx.doi.org/10.1002/cam4.3654
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author Zhou, Liqiang
Li, Shi H.
Wu, You
Xin, Lin
author_facet Zhou, Liqiang
Li, Shi H.
Wu, You
Xin, Lin
author_sort Zhou, Liqiang
collection PubMed
description Gastric cancer (GC) is a kind of malignancy with a high mortality and recurrence. An effective prediction model based on ideal biomarkers to assess prognosis could benefit patients for optimization of treatment. Bioinformatics has played an increasingly important role in the study of cancer diseases. Therefore, this study started with bioinformatics to establish a reliable prognostic model of gastric cancer. The gene expression data and clinical data of GC tissues and normal tissues were obtained from the Gene Expression Omnibus (GEO), Genotype‐Tissue Expression (GTEx), and The Cancer Genome Atlas (TCGA) profile database. We finally identified a four gene signature and constructed a prognostic model. The results of internal and external validation showed that the model is highly reliable. In addition, we also constructed a nomogram based on the model, which was verified by a calibration curve to show its predicted accuracy. Comprehensive analysis indicated that the four genes in the model are related to the occurrence and development of tumors, perhaps they are potential targets for tumor treatment. Generally, this prognostic model can bring potential benefits to patients with gastric cancer.
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spelling pubmed-81241072021-05-21 Establishment of a prognostic model of four genes in gastric cancer based on multiple data sets Zhou, Liqiang Li, Shi H. Wu, You Xin, Lin Cancer Med Cancer Biology Gastric cancer (GC) is a kind of malignancy with a high mortality and recurrence. An effective prediction model based on ideal biomarkers to assess prognosis could benefit patients for optimization of treatment. Bioinformatics has played an increasingly important role in the study of cancer diseases. Therefore, this study started with bioinformatics to establish a reliable prognostic model of gastric cancer. The gene expression data and clinical data of GC tissues and normal tissues were obtained from the Gene Expression Omnibus (GEO), Genotype‐Tissue Expression (GTEx), and The Cancer Genome Atlas (TCGA) profile database. We finally identified a four gene signature and constructed a prognostic model. The results of internal and external validation showed that the model is highly reliable. In addition, we also constructed a nomogram based on the model, which was verified by a calibration curve to show its predicted accuracy. Comprehensive analysis indicated that the four genes in the model are related to the occurrence and development of tumors, perhaps they are potential targets for tumor treatment. Generally, this prognostic model can bring potential benefits to patients with gastric cancer. John Wiley and Sons Inc. 2021-05-02 /pmc/articles/PMC8124107/ /pubmed/33934516 http://dx.doi.org/10.1002/cam4.3654 Text en © 2021 The Authors. Cancer Medicine published by John Wiley & Sons Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Cancer Biology
Zhou, Liqiang
Li, Shi H.
Wu, You
Xin, Lin
Establishment of a prognostic model of four genes in gastric cancer based on multiple data sets
title Establishment of a prognostic model of four genes in gastric cancer based on multiple data sets
title_full Establishment of a prognostic model of four genes in gastric cancer based on multiple data sets
title_fullStr Establishment of a prognostic model of four genes in gastric cancer based on multiple data sets
title_full_unstemmed Establishment of a prognostic model of four genes in gastric cancer based on multiple data sets
title_short Establishment of a prognostic model of four genes in gastric cancer based on multiple data sets
title_sort establishment of a prognostic model of four genes in gastric cancer based on multiple data sets
topic Cancer Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8124107/
https://www.ncbi.nlm.nih.gov/pubmed/33934516
http://dx.doi.org/10.1002/cam4.3654
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