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Ring artifact reduction via multiscale nonlocal collaborative filtering of spatially correlated noise
X-ray micro-tomography systems often suffer severe ring artifacts in reconstructed images. These artifacts are caused by defects in the detector, calibration errors, and fluctuations producing streak noise in the raw sinogram data. In this work, these streaks are modeled in the sinogram domain as ad...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
International Union of Crystallography
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8127377/ https://www.ncbi.nlm.nih.gov/pubmed/33949995 http://dx.doi.org/10.1107/S1600577521001910 |
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author | Mäkinen, Ymir Marchesini, Stefano Foi, Alessandro |
author_facet | Mäkinen, Ymir Marchesini, Stefano Foi, Alessandro |
author_sort | Mäkinen, Ymir |
collection | PubMed |
description | X-ray micro-tomography systems often suffer severe ring artifacts in reconstructed images. These artifacts are caused by defects in the detector, calibration errors, and fluctuations producing streak noise in the raw sinogram data. In this work, these streaks are modeled in the sinogram domain as additive stationary correlated noise upon logarithmic transformation. Based on this model, a streak removal procedure is proposed where the Block-Matching and 3-D (BM3D) filtering algorithm is applied across multiple scales, achieving state-of-the-art performance in both real and simulated data. Specifically, the proposed fully automatic procedure allows for attenuation of streak noise and the corresponding ring artifacts without creating major distortions common to other streak removal algorithms. |
format | Online Article Text |
id | pubmed-8127377 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-81273772021-06-14 Ring artifact reduction via multiscale nonlocal collaborative filtering of spatially correlated noise Mäkinen, Ymir Marchesini, Stefano Foi, Alessandro J Synchrotron Radiat Research Papers X-ray micro-tomography systems often suffer severe ring artifacts in reconstructed images. These artifacts are caused by defects in the detector, calibration errors, and fluctuations producing streak noise in the raw sinogram data. In this work, these streaks are modeled in the sinogram domain as additive stationary correlated noise upon logarithmic transformation. Based on this model, a streak removal procedure is proposed where the Block-Matching and 3-D (BM3D) filtering algorithm is applied across multiple scales, achieving state-of-the-art performance in both real and simulated data. Specifically, the proposed fully automatic procedure allows for attenuation of streak noise and the corresponding ring artifacts without creating major distortions common to other streak removal algorithms. International Union of Crystallography 2021-04-16 /pmc/articles/PMC8127377/ /pubmed/33949995 http://dx.doi.org/10.1107/S1600577521001910 Text en © Ymir Mäkinen et al. 2021 https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited. |
spellingShingle | Research Papers Mäkinen, Ymir Marchesini, Stefano Foi, Alessandro Ring artifact reduction via multiscale nonlocal collaborative filtering of spatially correlated noise |
title | Ring artifact reduction via multiscale nonlocal collaborative filtering of spatially correlated noise |
title_full | Ring artifact reduction via multiscale nonlocal collaborative filtering of spatially correlated noise |
title_fullStr | Ring artifact reduction via multiscale nonlocal collaborative filtering of spatially correlated noise |
title_full_unstemmed | Ring artifact reduction via multiscale nonlocal collaborative filtering of spatially correlated noise |
title_short | Ring artifact reduction via multiscale nonlocal collaborative filtering of spatially correlated noise |
title_sort | ring artifact reduction via multiscale nonlocal collaborative filtering of spatially correlated noise |
topic | Research Papers |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8127377/ https://www.ncbi.nlm.nih.gov/pubmed/33949995 http://dx.doi.org/10.1107/S1600577521001910 |
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