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Development of a prognostic index based on immunogenomic landscape analysis in glioma

BACKGROUND: Glioma is the most common intracranial tumor. The inflammatory response actively participates in the malignancy of gliomas. There is still limited knowledge about the biological function of immune‐related genes (IRGs) and their potential involvement in the malignancy of gliomas. METHODS:...

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Autores principales: Luo, Haitao, Tao, Chuming, Wang, Peng, Li, Jingying, Huang, Kai, Zhu, Xingen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8127549/
https://www.ncbi.nlm.nih.gov/pubmed/33503296
http://dx.doi.org/10.1002/iid3.407
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author Luo, Haitao
Tao, Chuming
Wang, Peng
Li, Jingying
Huang, Kai
Zhu, Xingen
author_facet Luo, Haitao
Tao, Chuming
Wang, Peng
Li, Jingying
Huang, Kai
Zhu, Xingen
author_sort Luo, Haitao
collection PubMed
description BACKGROUND: Glioma is the most common intracranial tumor. The inflammatory response actively participates in the malignancy of gliomas. There is still limited knowledge about the biological function of immune‐related genes (IRGs) and their potential involvement in the malignancy of gliomas. METHODS: We screened differentially expressed and survival‐associated IRGs, and explored their potential molecular characteristics. Then we developed a prognostic index derived from seven hub IRGs. A prognostic nomogram was built to indicate the prognostic value of the prognostic index and seven IRGs. We characterized the immune infiltration landscape to analyze tumor‐immune interactions. The real‐time quantitative polymerase chain reaction assay was performed to validate bioinformatics results. RESULTS: The differentially expressed IRGs are involved in cell chemotaxis, cytokine activity, and the chemokine‐mediated signaling pathway. The prognostic index derived from seven IRGs had clinical prognostic value in glioma, and positively correlated with the malignant clinicopathological characteristics. A nomogram further indicated that the prognostic index and seven hub IRGs had clinical prognostic value for gliomas. We revealed that the prognostic index could reflect the state of the glioma immune microenvironment. CONCLUSION: This study demonstrates the importance of an IRG‐based prognostic index as a potential biomarker for predicting malignancy in gliomas.
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spelling pubmed-81275492021-05-21 Development of a prognostic index based on immunogenomic landscape analysis in glioma Luo, Haitao Tao, Chuming Wang, Peng Li, Jingying Huang, Kai Zhu, Xingen Immun Inflamm Dis Original Research BACKGROUND: Glioma is the most common intracranial tumor. The inflammatory response actively participates in the malignancy of gliomas. There is still limited knowledge about the biological function of immune‐related genes (IRGs) and their potential involvement in the malignancy of gliomas. METHODS: We screened differentially expressed and survival‐associated IRGs, and explored their potential molecular characteristics. Then we developed a prognostic index derived from seven hub IRGs. A prognostic nomogram was built to indicate the prognostic value of the prognostic index and seven IRGs. We characterized the immune infiltration landscape to analyze tumor‐immune interactions. The real‐time quantitative polymerase chain reaction assay was performed to validate bioinformatics results. RESULTS: The differentially expressed IRGs are involved in cell chemotaxis, cytokine activity, and the chemokine‐mediated signaling pathway. The prognostic index derived from seven IRGs had clinical prognostic value in glioma, and positively correlated with the malignant clinicopathological characteristics. A nomogram further indicated that the prognostic index and seven hub IRGs had clinical prognostic value for gliomas. We revealed that the prognostic index could reflect the state of the glioma immune microenvironment. CONCLUSION: This study demonstrates the importance of an IRG‐based prognostic index as a potential biomarker for predicting malignancy in gliomas. John Wiley and Sons Inc. 2021-01-27 /pmc/articles/PMC8127549/ /pubmed/33503296 http://dx.doi.org/10.1002/iid3.407 Text en © 2021 The Authors. Immunity, Inflammation and Disease published by John Wiley & Sons Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Research
Luo, Haitao
Tao, Chuming
Wang, Peng
Li, Jingying
Huang, Kai
Zhu, Xingen
Development of a prognostic index based on immunogenomic landscape analysis in glioma
title Development of a prognostic index based on immunogenomic landscape analysis in glioma
title_full Development of a prognostic index based on immunogenomic landscape analysis in glioma
title_fullStr Development of a prognostic index based on immunogenomic landscape analysis in glioma
title_full_unstemmed Development of a prognostic index based on immunogenomic landscape analysis in glioma
title_short Development of a prognostic index based on immunogenomic landscape analysis in glioma
title_sort development of a prognostic index based on immunogenomic landscape analysis in glioma
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8127549/
https://www.ncbi.nlm.nih.gov/pubmed/33503296
http://dx.doi.org/10.1002/iid3.407
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