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Development of a prognostic index based on immunogenomic landscape analysis in glioma
BACKGROUND: Glioma is the most common intracranial tumor. The inflammatory response actively participates in the malignancy of gliomas. There is still limited knowledge about the biological function of immune‐related genes (IRGs) and their potential involvement in the malignancy of gliomas. METHODS:...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8127549/ https://www.ncbi.nlm.nih.gov/pubmed/33503296 http://dx.doi.org/10.1002/iid3.407 |
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author | Luo, Haitao Tao, Chuming Wang, Peng Li, Jingying Huang, Kai Zhu, Xingen |
author_facet | Luo, Haitao Tao, Chuming Wang, Peng Li, Jingying Huang, Kai Zhu, Xingen |
author_sort | Luo, Haitao |
collection | PubMed |
description | BACKGROUND: Glioma is the most common intracranial tumor. The inflammatory response actively participates in the malignancy of gliomas. There is still limited knowledge about the biological function of immune‐related genes (IRGs) and their potential involvement in the malignancy of gliomas. METHODS: We screened differentially expressed and survival‐associated IRGs, and explored their potential molecular characteristics. Then we developed a prognostic index derived from seven hub IRGs. A prognostic nomogram was built to indicate the prognostic value of the prognostic index and seven IRGs. We characterized the immune infiltration landscape to analyze tumor‐immune interactions. The real‐time quantitative polymerase chain reaction assay was performed to validate bioinformatics results. RESULTS: The differentially expressed IRGs are involved in cell chemotaxis, cytokine activity, and the chemokine‐mediated signaling pathway. The prognostic index derived from seven IRGs had clinical prognostic value in glioma, and positively correlated with the malignant clinicopathological characteristics. A nomogram further indicated that the prognostic index and seven hub IRGs had clinical prognostic value for gliomas. We revealed that the prognostic index could reflect the state of the glioma immune microenvironment. CONCLUSION: This study demonstrates the importance of an IRG‐based prognostic index as a potential biomarker for predicting malignancy in gliomas. |
format | Online Article Text |
id | pubmed-8127549 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-81275492021-05-21 Development of a prognostic index based on immunogenomic landscape analysis in glioma Luo, Haitao Tao, Chuming Wang, Peng Li, Jingying Huang, Kai Zhu, Xingen Immun Inflamm Dis Original Research BACKGROUND: Glioma is the most common intracranial tumor. The inflammatory response actively participates in the malignancy of gliomas. There is still limited knowledge about the biological function of immune‐related genes (IRGs) and their potential involvement in the malignancy of gliomas. METHODS: We screened differentially expressed and survival‐associated IRGs, and explored their potential molecular characteristics. Then we developed a prognostic index derived from seven hub IRGs. A prognostic nomogram was built to indicate the prognostic value of the prognostic index and seven IRGs. We characterized the immune infiltration landscape to analyze tumor‐immune interactions. The real‐time quantitative polymerase chain reaction assay was performed to validate bioinformatics results. RESULTS: The differentially expressed IRGs are involved in cell chemotaxis, cytokine activity, and the chemokine‐mediated signaling pathway. The prognostic index derived from seven IRGs had clinical prognostic value in glioma, and positively correlated with the malignant clinicopathological characteristics. A nomogram further indicated that the prognostic index and seven hub IRGs had clinical prognostic value for gliomas. We revealed that the prognostic index could reflect the state of the glioma immune microenvironment. CONCLUSION: This study demonstrates the importance of an IRG‐based prognostic index as a potential biomarker for predicting malignancy in gliomas. John Wiley and Sons Inc. 2021-01-27 /pmc/articles/PMC8127549/ /pubmed/33503296 http://dx.doi.org/10.1002/iid3.407 Text en © 2021 The Authors. Immunity, Inflammation and Disease published by John Wiley & Sons Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Research Luo, Haitao Tao, Chuming Wang, Peng Li, Jingying Huang, Kai Zhu, Xingen Development of a prognostic index based on immunogenomic landscape analysis in glioma |
title | Development of a prognostic index based on immunogenomic landscape analysis in glioma |
title_full | Development of a prognostic index based on immunogenomic landscape analysis in glioma |
title_fullStr | Development of a prognostic index based on immunogenomic landscape analysis in glioma |
title_full_unstemmed | Development of a prognostic index based on immunogenomic landscape analysis in glioma |
title_short | Development of a prognostic index based on immunogenomic landscape analysis in glioma |
title_sort | development of a prognostic index based on immunogenomic landscape analysis in glioma |
topic | Original Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8127549/ https://www.ncbi.nlm.nih.gov/pubmed/33503296 http://dx.doi.org/10.1002/iid3.407 |
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