Cargando…
The complete plastome of Polytrichum commune Hedw. (Polytrichaceae, Bryophyta)
Polytrichum commune, one of hair-cap mosses, is the type species of the genus Polytrichum Hedw. (Polytrichaceae). Here we present its complete plastome. The plastome of P. commune is successfully assembled from raw reads sequenced by HiSeq X ten system. Its total length is 126,323 bp consisting of f...
Autores principales: | , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8128170/ https://www.ncbi.nlm.nih.gov/pubmed/34027080 http://dx.doi.org/10.1080/23802359.2021.1927223 |
_version_ | 1783694066321457152 |
---|---|
author | Jin, Xin-Jie Zhu, Rui-Liang |
author_facet | Jin, Xin-Jie Zhu, Rui-Liang |
author_sort | Jin, Xin-Jie |
collection | PubMed |
description | Polytrichum commune, one of hair-cap mosses, is the type species of the genus Polytrichum Hedw. (Polytrichaceae). Here we present its complete plastome. The plastome of P. commune is successfully assembled from raw reads sequenced by HiSeq X ten system. Its total length is 126,323 bp consisting of four regions: large single copy (LSC) region (88,070 bp), small single copy (SSC) region (16,717 bp), and inverted repeats (IRs; 9,680 bp per each). It contains 128 genes (84 coding genes, eight rRNAs, and 36 tRNAs); nine genes (four rRNAs and five tRNAs) are duplicated in IR regions. The overall GC content is 28.9% and in the LSC, SSC and IR regions is 26.1%, 25.1%, and 45.5%, respectively. This plastome is an important sequence resource for further studies on the class Polytrichopsida. |
format | Online Article Text |
id | pubmed-8128170 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-81281702021-05-21 The complete plastome of Polytrichum commune Hedw. (Polytrichaceae, Bryophyta) Jin, Xin-Jie Zhu, Rui-Liang Mitochondrial DNA B Resour Mitogenome Announcement Polytrichum commune, one of hair-cap mosses, is the type species of the genus Polytrichum Hedw. (Polytrichaceae). Here we present its complete plastome. The plastome of P. commune is successfully assembled from raw reads sequenced by HiSeq X ten system. Its total length is 126,323 bp consisting of four regions: large single copy (LSC) region (88,070 bp), small single copy (SSC) region (16,717 bp), and inverted repeats (IRs; 9,680 bp per each). It contains 128 genes (84 coding genes, eight rRNAs, and 36 tRNAs); nine genes (four rRNAs and five tRNAs) are duplicated in IR regions. The overall GC content is 28.9% and in the LSC, SSC and IR regions is 26.1%, 25.1%, and 45.5%, respectively. This plastome is an important sequence resource for further studies on the class Polytrichopsida. Taylor & Francis 2021-05-13 /pmc/articles/PMC8128170/ /pubmed/34027080 http://dx.doi.org/10.1080/23802359.2021.1927223 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Jin, Xin-Jie Zhu, Rui-Liang The complete plastome of Polytrichum commune Hedw. (Polytrichaceae, Bryophyta) |
title | The complete plastome of Polytrichum commune Hedw. (Polytrichaceae, Bryophyta) |
title_full | The complete plastome of Polytrichum commune Hedw. (Polytrichaceae, Bryophyta) |
title_fullStr | The complete plastome of Polytrichum commune Hedw. (Polytrichaceae, Bryophyta) |
title_full_unstemmed | The complete plastome of Polytrichum commune Hedw. (Polytrichaceae, Bryophyta) |
title_short | The complete plastome of Polytrichum commune Hedw. (Polytrichaceae, Bryophyta) |
title_sort | complete plastome of polytrichum commune hedw. (polytrichaceae, bryophyta) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8128170/ https://www.ncbi.nlm.nih.gov/pubmed/34027080 http://dx.doi.org/10.1080/23802359.2021.1927223 |
work_keys_str_mv | AT jinxinjie thecompleteplastomeofpolytrichumcommunehedwpolytrichaceaebryophyta AT zhuruiliang thecompleteplastomeofpolytrichumcommunehedwpolytrichaceaebryophyta AT jinxinjie completeplastomeofpolytrichumcommunehedwpolytrichaceaebryophyta AT zhuruiliang completeplastomeofpolytrichumcommunehedwpolytrichaceaebryophyta |