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The complete plastome of Polytrichum commune Hedw. (Polytrichaceae, Bryophyta)

Polytrichum commune, one of hair-cap mosses, is the type species of the genus Polytrichum Hedw. (Polytrichaceae). Here we present its complete plastome. The plastome of P. commune is successfully assembled from raw reads sequenced by HiSeq X ten system. Its total length is 126,323 bp consisting of f...

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Autores principales: Jin, Xin-Jie, Zhu, Rui-Liang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8128170/
https://www.ncbi.nlm.nih.gov/pubmed/34027080
http://dx.doi.org/10.1080/23802359.2021.1927223
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author Jin, Xin-Jie
Zhu, Rui-Liang
author_facet Jin, Xin-Jie
Zhu, Rui-Liang
author_sort Jin, Xin-Jie
collection PubMed
description Polytrichum commune, one of hair-cap mosses, is the type species of the genus Polytrichum Hedw. (Polytrichaceae). Here we present its complete plastome. The plastome of P. commune is successfully assembled from raw reads sequenced by HiSeq X ten system. Its total length is 126,323 bp consisting of four regions: large single copy (LSC) region (88,070 bp), small single copy (SSC) region (16,717 bp), and inverted repeats (IRs; 9,680 bp per each). It contains 128 genes (84 coding genes, eight rRNAs, and 36 tRNAs); nine genes (four rRNAs and five tRNAs) are duplicated in IR regions. The overall GC content is 28.9% and in the LSC, SSC and IR regions is 26.1%, 25.1%, and 45.5%, respectively. This plastome is an important sequence resource for further studies on the class Polytrichopsida.
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spelling pubmed-81281702021-05-21 The complete plastome of Polytrichum commune Hedw. (Polytrichaceae, Bryophyta) Jin, Xin-Jie Zhu, Rui-Liang Mitochondrial DNA B Resour Mitogenome Announcement Polytrichum commune, one of hair-cap mosses, is the type species of the genus Polytrichum Hedw. (Polytrichaceae). Here we present its complete plastome. The plastome of P. commune is successfully assembled from raw reads sequenced by HiSeq X ten system. Its total length is 126,323 bp consisting of four regions: large single copy (LSC) region (88,070 bp), small single copy (SSC) region (16,717 bp), and inverted repeats (IRs; 9,680 bp per each). It contains 128 genes (84 coding genes, eight rRNAs, and 36 tRNAs); nine genes (four rRNAs and five tRNAs) are duplicated in IR regions. The overall GC content is 28.9% and in the LSC, SSC and IR regions is 26.1%, 25.1%, and 45.5%, respectively. This plastome is an important sequence resource for further studies on the class Polytrichopsida. Taylor & Francis 2021-05-13 /pmc/articles/PMC8128170/ /pubmed/34027080 http://dx.doi.org/10.1080/23802359.2021.1927223 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Jin, Xin-Jie
Zhu, Rui-Liang
The complete plastome of Polytrichum commune Hedw. (Polytrichaceae, Bryophyta)
title The complete plastome of Polytrichum commune Hedw. (Polytrichaceae, Bryophyta)
title_full The complete plastome of Polytrichum commune Hedw. (Polytrichaceae, Bryophyta)
title_fullStr The complete plastome of Polytrichum commune Hedw. (Polytrichaceae, Bryophyta)
title_full_unstemmed The complete plastome of Polytrichum commune Hedw. (Polytrichaceae, Bryophyta)
title_short The complete plastome of Polytrichum commune Hedw. (Polytrichaceae, Bryophyta)
title_sort complete plastome of polytrichum commune hedw. (polytrichaceae, bryophyta)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8128170/
https://www.ncbi.nlm.nih.gov/pubmed/34027080
http://dx.doi.org/10.1080/23802359.2021.1927223
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