Cargando…
A database of flavivirus RNA structures with a search algorithm for pseudoknots and triple base interactions
MOTIVATION: The Flavivirus genus includes several important pathogens, such as Zika, dengue and yellow fever virus. Flavivirus RNA genomes contain a number of functionally important structures in their 3′ untranslated regions (3′UTRs). Due to the diversity of sequences and topologies of these struct...
Autores principales: | Zammit, Alan, Helwerda, Leon, Olsthoorn, René C L, Verbeek, Fons J, Gultyaev, Alexander P |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8128465/ https://www.ncbi.nlm.nih.gov/pubmed/32866223 http://dx.doi.org/10.1093/bioinformatics/btaa759 |
Ejemplares similares
-
Fungal metabarcoding data integration framework for the MycoDiversity DataBase (MDDB)
por: Martorelli, Irene, et al.
Publicado: (2020) -
Xrn1-resistant RNA structures are well-conserved within the genus flavivirus
por: Dilweg, Ivar W., et al.
Publicado: (2020) -
Replication of alphaviruses requires a pseudoknot that involves the poly(A) tail
por: Olsthoorn, René C.L.
Publicado: (2022) -
PseudoBase++: an extension of PseudoBase for easy searching, formatting and visualization of pseudoknots
por: Taufer, Michela, et al.
Publicado: (2009) -
Functional analysis of the SRV-1 RNA frameshifting pseudoknot
por: Olsthoorn, René C. L., et al.
Publicado: (2010)