Cargando…
Proteins interacting with Leishmania major PUF1: A proteomic dataset
Leishmania parasites must deal with stressful environmental conditions (thermal, nutritional and oxidative) along their digenetic life cycles. This requires drastic changes in gene expression, which in this parasite occurs mainly through post-transcriptional mechanisms involving RNA binding proteins...
Autores principales: | , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8129642/ https://www.ncbi.nlm.nih.gov/pubmed/34026959 http://dx.doi.org/10.1016/j.dib.2020.106594 |
_version_ | 1783694339876061184 |
---|---|
author | Sanchiz, África López-García, Darío García-García, Carlos Ozaez, Irene Aguado, Begoña Requena, Jose María |
author_facet | Sanchiz, África López-García, Darío García-García, Carlos Ozaez, Irene Aguado, Begoña Requena, Jose María |
author_sort | Sanchiz, África |
collection | PubMed |
description | Leishmania parasites must deal with stressful environmental conditions (thermal, nutritional and oxidative) along their digenetic life cycles. This requires drastic changes in gene expression, which in this parasite occurs mainly through post-transcriptional mechanisms involving RNA binding proteins (RBPs). PUF proteins, a class of RBPs existing in most eukaryotic organisms, might play too an essential role modulating the fate of mRNAs and regulating gene expression in Leishmania parasites. A proteomic approach to identify putative protein partners (interactome) of the Leishmania major PUF1 protein was performed. The PUF1 interactome was characterized by co-immunoprecipitation using L. major cellular extracts and an anti-LiPUF1 antibody, and a subsequent analysis of the co-immunoprecipitated proteins by mass-spectrometry, identifying 90 LmPUF1 candidate partners. Remarkably, many of the identified proteins are other RBPs and/or putative P bodies and mRNA-exporting machinery components. Raw mass spectrometry data are available via ProteomeXchange with identifier PXD022581. |
format | Online Article Text |
id | pubmed-8129642 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-81296422021-05-21 Proteins interacting with Leishmania major PUF1: A proteomic dataset Sanchiz, África López-García, Darío García-García, Carlos Ozaez, Irene Aguado, Begoña Requena, Jose María Data Brief Data Article Leishmania parasites must deal with stressful environmental conditions (thermal, nutritional and oxidative) along their digenetic life cycles. This requires drastic changes in gene expression, which in this parasite occurs mainly through post-transcriptional mechanisms involving RNA binding proteins (RBPs). PUF proteins, a class of RBPs existing in most eukaryotic organisms, might play too an essential role modulating the fate of mRNAs and regulating gene expression in Leishmania parasites. A proteomic approach to identify putative protein partners (interactome) of the Leishmania major PUF1 protein was performed. The PUF1 interactome was characterized by co-immunoprecipitation using L. major cellular extracts and an anti-LiPUF1 antibody, and a subsequent analysis of the co-immunoprecipitated proteins by mass-spectrometry, identifying 90 LmPUF1 candidate partners. Remarkably, many of the identified proteins are other RBPs and/or putative P bodies and mRNA-exporting machinery components. Raw mass spectrometry data are available via ProteomeXchange with identifier PXD022581. Elsevier 2020-11-26 /pmc/articles/PMC8129642/ /pubmed/34026959 http://dx.doi.org/10.1016/j.dib.2020.106594 Text en © 2020 The Authors https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Data Article Sanchiz, África López-García, Darío García-García, Carlos Ozaez, Irene Aguado, Begoña Requena, Jose María Proteins interacting with Leishmania major PUF1: A proteomic dataset |
title | Proteins interacting with Leishmania major PUF1: A proteomic dataset |
title_full | Proteins interacting with Leishmania major PUF1: A proteomic dataset |
title_fullStr | Proteins interacting with Leishmania major PUF1: A proteomic dataset |
title_full_unstemmed | Proteins interacting with Leishmania major PUF1: A proteomic dataset |
title_short | Proteins interacting with Leishmania major PUF1: A proteomic dataset |
title_sort | proteins interacting with leishmania major puf1: a proteomic dataset |
topic | Data Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8129642/ https://www.ncbi.nlm.nih.gov/pubmed/34026959 http://dx.doi.org/10.1016/j.dib.2020.106594 |
work_keys_str_mv | AT sanchizafrica proteinsinteractingwithleishmaniamajorpuf1aproteomicdataset AT lopezgarciadario proteinsinteractingwithleishmaniamajorpuf1aproteomicdataset AT garciagarciacarlos proteinsinteractingwithleishmaniamajorpuf1aproteomicdataset AT ozaezirene proteinsinteractingwithleishmaniamajorpuf1aproteomicdataset AT aguadobegona proteinsinteractingwithleishmaniamajorpuf1aproteomicdataset AT requenajosemaria proteinsinteractingwithleishmaniamajorpuf1aproteomicdataset |