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Proteins interacting with Leishmania major PUF1: A proteomic dataset

Leishmania parasites must deal with stressful environmental conditions (thermal, nutritional and oxidative) along their digenetic life cycles. This requires drastic changes in gene expression, which in this parasite occurs mainly through post-transcriptional mechanisms involving RNA binding proteins...

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Autores principales: Sanchiz, África, López-García, Darío, García-García, Carlos, Ozaez, Irene, Aguado, Begoña, Requena, Jose María
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8129642/
https://www.ncbi.nlm.nih.gov/pubmed/34026959
http://dx.doi.org/10.1016/j.dib.2020.106594
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author Sanchiz, África
López-García, Darío
García-García, Carlos
Ozaez, Irene
Aguado, Begoña
Requena, Jose María
author_facet Sanchiz, África
López-García, Darío
García-García, Carlos
Ozaez, Irene
Aguado, Begoña
Requena, Jose María
author_sort Sanchiz, África
collection PubMed
description Leishmania parasites must deal with stressful environmental conditions (thermal, nutritional and oxidative) along their digenetic life cycles. This requires drastic changes in gene expression, which in this parasite occurs mainly through post-transcriptional mechanisms involving RNA binding proteins (RBPs). PUF proteins, a class of RBPs existing in most eukaryotic organisms, might play too an essential role modulating the fate of mRNAs and regulating gene expression in Leishmania parasites. A proteomic approach to identify putative protein partners (interactome) of the Leishmania major PUF1 protein was performed. The PUF1 interactome was characterized by co-immunoprecipitation using L. major cellular extracts and an anti-LiPUF1 antibody, and a subsequent analysis of the co-immunoprecipitated proteins by mass-spectrometry, identifying 90 LmPUF1 candidate partners. Remarkably, many of the identified proteins are other RBPs and/or putative P bodies and mRNA-exporting machinery components. Raw mass spectrometry data are available via ProteomeXchange with identifier PXD022581.
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spelling pubmed-81296422021-05-21 Proteins interacting with Leishmania major PUF1: A proteomic dataset Sanchiz, África López-García, Darío García-García, Carlos Ozaez, Irene Aguado, Begoña Requena, Jose María Data Brief Data Article Leishmania parasites must deal with stressful environmental conditions (thermal, nutritional and oxidative) along their digenetic life cycles. This requires drastic changes in gene expression, which in this parasite occurs mainly through post-transcriptional mechanisms involving RNA binding proteins (RBPs). PUF proteins, a class of RBPs existing in most eukaryotic organisms, might play too an essential role modulating the fate of mRNAs and regulating gene expression in Leishmania parasites. A proteomic approach to identify putative protein partners (interactome) of the Leishmania major PUF1 protein was performed. The PUF1 interactome was characterized by co-immunoprecipitation using L. major cellular extracts and an anti-LiPUF1 antibody, and a subsequent analysis of the co-immunoprecipitated proteins by mass-spectrometry, identifying 90 LmPUF1 candidate partners. Remarkably, many of the identified proteins are other RBPs and/or putative P bodies and mRNA-exporting machinery components. Raw mass spectrometry data are available via ProteomeXchange with identifier PXD022581. Elsevier 2020-11-26 /pmc/articles/PMC8129642/ /pubmed/34026959 http://dx.doi.org/10.1016/j.dib.2020.106594 Text en © 2020 The Authors https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Data Article
Sanchiz, África
López-García, Darío
García-García, Carlos
Ozaez, Irene
Aguado, Begoña
Requena, Jose María
Proteins interacting with Leishmania major PUF1: A proteomic dataset
title Proteins interacting with Leishmania major PUF1: A proteomic dataset
title_full Proteins interacting with Leishmania major PUF1: A proteomic dataset
title_fullStr Proteins interacting with Leishmania major PUF1: A proteomic dataset
title_full_unstemmed Proteins interacting with Leishmania major PUF1: A proteomic dataset
title_short Proteins interacting with Leishmania major PUF1: A proteomic dataset
title_sort proteins interacting with leishmania major puf1: a proteomic dataset
topic Data Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8129642/
https://www.ncbi.nlm.nih.gov/pubmed/34026959
http://dx.doi.org/10.1016/j.dib.2020.106594
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