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In silico analysis of cross reactivity among phospholipases from Hymenoptera species

Background: Phospholipases are enzymes with the capacity to hydrolyze membrane lipids and have been characterized in several allergenic sources, such as hymenoptera species. However, cross-reactivity among phospholipases allergens are little understood. The objective of this study was to determine p...

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Autores principales: Emiliani, Yuliana, Sánchez, Andrés, Munera, Marlon, Sánchez, Jorge, Aparicio, Dilia
Formato: Online Artículo Texto
Lenguaje:English
Publicado: F1000 Research Limited 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8129813/
https://www.ncbi.nlm.nih.gov/pubmed/34046162
http://dx.doi.org/10.12688/f1000research.27089.2
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author Emiliani, Yuliana
Sánchez, Andrés
Munera, Marlon
Sánchez, Jorge
Aparicio, Dilia
author_facet Emiliani, Yuliana
Sánchez, Andrés
Munera, Marlon
Sánchez, Jorge
Aparicio, Dilia
author_sort Emiliani, Yuliana
collection PubMed
description Background: Phospholipases are enzymes with the capacity to hydrolyze membrane lipids and have been characterized in several allergenic sources, such as hymenoptera species. However, cross-reactivity among phospholipases allergens are little understood. The objective of this study was to determine potential antigenic regions involved in cross-reactivity among allergens of phospholipases using an in silico approach. Methods: In total, 18 amino acids sequences belonging to phospholipase family derived from species of the order hymenoptera were retrieved from the UniProt database to perform phylogenetic analysis to determine the closest molecular relationship. Multialignment was done to identify conserved regions and matched with antigenic regions predicted by ElliPro server. 3D models were obtained from modeling by homology and were used to locate cross-reactive antigenic regions. Results: Phylogenetic analysis showed that the 18 phospholipases split into four monophyletic clades (named here as A, B, C and D). Phospholipases from A clade shared an amino acid sequences’ identity of 79%. Antigenic patches predicted by Ellipro were located in highly conserved regions, suggesting that they could be involved in cross-reactivity in this group (Ves v 1, Ves a 1 and Ves m 1). Conclusions: At this point, we advanced to the characterization of potential antigenic sites involved in cross-reactivity among phospholipases. Inhibition assays are needed to confirm our finding.
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spelling pubmed-81298132021-05-26 In silico analysis of cross reactivity among phospholipases from Hymenoptera species Emiliani, Yuliana Sánchez, Andrés Munera, Marlon Sánchez, Jorge Aparicio, Dilia F1000Res Research Article Background: Phospholipases are enzymes with the capacity to hydrolyze membrane lipids and have been characterized in several allergenic sources, such as hymenoptera species. However, cross-reactivity among phospholipases allergens are little understood. The objective of this study was to determine potential antigenic regions involved in cross-reactivity among allergens of phospholipases using an in silico approach. Methods: In total, 18 amino acids sequences belonging to phospholipase family derived from species of the order hymenoptera were retrieved from the UniProt database to perform phylogenetic analysis to determine the closest molecular relationship. Multialignment was done to identify conserved regions and matched with antigenic regions predicted by ElliPro server. 3D models were obtained from modeling by homology and were used to locate cross-reactive antigenic regions. Results: Phylogenetic analysis showed that the 18 phospholipases split into four monophyletic clades (named here as A, B, C and D). Phospholipases from A clade shared an amino acid sequences’ identity of 79%. Antigenic patches predicted by Ellipro were located in highly conserved regions, suggesting that they could be involved in cross-reactivity in this group (Ves v 1, Ves a 1 and Ves m 1). Conclusions: At this point, we advanced to the characterization of potential antigenic sites involved in cross-reactivity among phospholipases. Inhibition assays are needed to confirm our finding. F1000 Research Limited 2021-03-29 /pmc/articles/PMC8129813/ /pubmed/34046162 http://dx.doi.org/10.12688/f1000research.27089.2 Text en Copyright: © 2021 Emiliani Y et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Emiliani, Yuliana
Sánchez, Andrés
Munera, Marlon
Sánchez, Jorge
Aparicio, Dilia
In silico analysis of cross reactivity among phospholipases from Hymenoptera species
title In silico analysis of cross reactivity among phospholipases from Hymenoptera species
title_full In silico analysis of cross reactivity among phospholipases from Hymenoptera species
title_fullStr In silico analysis of cross reactivity among phospholipases from Hymenoptera species
title_full_unstemmed In silico analysis of cross reactivity among phospholipases from Hymenoptera species
title_short In silico analysis of cross reactivity among phospholipases from Hymenoptera species
title_sort in silico analysis of cross reactivity among phospholipases from hymenoptera species
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8129813/
https://www.ncbi.nlm.nih.gov/pubmed/34046162
http://dx.doi.org/10.12688/f1000research.27089.2
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