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Diagnosing COVID-19 disease using an efficient CAD system

Todays, COVID-19 has caused much death and its spreading speed is increasing, regarding virus mutation. This outbreak warns diagnosing infected people is an important issue. So, in this research, a computer-aided diagnosis (CAD) system called COV-CAD is proposed for diagnosing COVID-19 disease. This...

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Autores principales: Shakarami, Ashkan, Menhaj, Mohammad Bagher, Tarrah, Hadis
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier GmbH. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8130607/
https://www.ncbi.nlm.nih.gov/pubmed/34028466
http://dx.doi.org/10.1016/j.ijleo.2021.167199
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author Shakarami, Ashkan
Menhaj, Mohammad Bagher
Tarrah, Hadis
author_facet Shakarami, Ashkan
Menhaj, Mohammad Bagher
Tarrah, Hadis
author_sort Shakarami, Ashkan
collection PubMed
description Todays, COVID-19 has caused much death and its spreading speed is increasing, regarding virus mutation. This outbreak warns diagnosing infected people is an important issue. So, in this research, a computer-aided diagnosis (CAD) system called COV-CAD is proposed for diagnosing COVID-19 disease. This COV-CAD system is created by a feature extractor, a classification method, and a content-based imaged retrieval (CBIR) system. The proposed feature extractor is created by using the modified AlexNet CNN. The first modification changes ReLU activation functions to LeakyReLU for increasing efficiency. The second change is converting a fully connected (FC) layer of AlexNet CNN with a new FC, which results in reducing learnable parameters and training time. Another FC layer with dimensions 1 × 64 is added at the end of the feature extractor as the feature vector. In the classification section, a new classification method is defined in which the majority voting technique is applied on outputs of CBIR, SVM, KNN, and Random Forest for final diagnosing. Furthermore, in retrieval section, the proposed method uses CBIR because of its ability to retrieve the most similar images to the image of a patient. Since this feature helps physicians to find the most similar cases, they could conduct further statistical evaluations on profiles of similar patients. The system has been evaluated by accuracy, sensitivity, specificity, F1-score, and mean average precision and its accuracy for CT and X-ray datasets is 93.20% and 99.38%, respectively. The results demonstrate that the proposed method is more efficient than other similar studies.
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spelling pubmed-81306072021-05-18 Diagnosing COVID-19 disease using an efficient CAD system Shakarami, Ashkan Menhaj, Mohammad Bagher Tarrah, Hadis Optik (Stuttg) Original Research Article Todays, COVID-19 has caused much death and its spreading speed is increasing, regarding virus mutation. This outbreak warns diagnosing infected people is an important issue. So, in this research, a computer-aided diagnosis (CAD) system called COV-CAD is proposed for diagnosing COVID-19 disease. This COV-CAD system is created by a feature extractor, a classification method, and a content-based imaged retrieval (CBIR) system. The proposed feature extractor is created by using the modified AlexNet CNN. The first modification changes ReLU activation functions to LeakyReLU for increasing efficiency. The second change is converting a fully connected (FC) layer of AlexNet CNN with a new FC, which results in reducing learnable parameters and training time. Another FC layer with dimensions 1 × 64 is added at the end of the feature extractor as the feature vector. In the classification section, a new classification method is defined in which the majority voting technique is applied on outputs of CBIR, SVM, KNN, and Random Forest for final diagnosing. Furthermore, in retrieval section, the proposed method uses CBIR because of its ability to retrieve the most similar images to the image of a patient. Since this feature helps physicians to find the most similar cases, they could conduct further statistical evaluations on profiles of similar patients. The system has been evaluated by accuracy, sensitivity, specificity, F1-score, and mean average precision and its accuracy for CT and X-ray datasets is 93.20% and 99.38%, respectively. The results demonstrate that the proposed method is more efficient than other similar studies. Elsevier GmbH. 2021-09 2021-05-18 /pmc/articles/PMC8130607/ /pubmed/34028466 http://dx.doi.org/10.1016/j.ijleo.2021.167199 Text en © 2021 Elsevier GmbH. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Original Research Article
Shakarami, Ashkan
Menhaj, Mohammad Bagher
Tarrah, Hadis
Diagnosing COVID-19 disease using an efficient CAD system
title Diagnosing COVID-19 disease using an efficient CAD system
title_full Diagnosing COVID-19 disease using an efficient CAD system
title_fullStr Diagnosing COVID-19 disease using an efficient CAD system
title_full_unstemmed Diagnosing COVID-19 disease using an efficient CAD system
title_short Diagnosing COVID-19 disease using an efficient CAD system
title_sort diagnosing covid-19 disease using an efficient cad system
topic Original Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8130607/
https://www.ncbi.nlm.nih.gov/pubmed/34028466
http://dx.doi.org/10.1016/j.ijleo.2021.167199
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