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Differentiation of two swim bladdered fish species using next generation wideband hydroacoustics

Monitoring fish populations in large, deep water bodies by conventional capture methodologies requires intensive fishing effort and often causes mass mortality of fish. Thus, it can be difficult to collect sufficient data using capture methods for understanding fine scale community dynamics associat...

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Autores principales: Gugele, Sarah M., Widmer, Marcus, Baer, Jan, DeWeber, J. Tyrell, Balk, Helge, Brinker, Alexander
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8131709/
https://www.ncbi.nlm.nih.gov/pubmed/34006900
http://dx.doi.org/10.1038/s41598-021-89941-7
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author Gugele, Sarah M.
Widmer, Marcus
Baer, Jan
DeWeber, J. Tyrell
Balk, Helge
Brinker, Alexander
author_facet Gugele, Sarah M.
Widmer, Marcus
Baer, Jan
DeWeber, J. Tyrell
Balk, Helge
Brinker, Alexander
author_sort Gugele, Sarah M.
collection PubMed
description Monitoring fish populations in large, deep water bodies by conventional capture methodologies requires intensive fishing effort and often causes mass mortality of fish. Thus, it can be difficult to collect sufficient data using capture methods for understanding fine scale community dynamics associated with issues such as climate change or species invasion. Hydroacoustic monitoring is an alternative, less invasive technology that can collect higher resolution data over large temporal and spatial scales. Monitoring multiple species with hydroacoustics, however, usually requires conventional sampling to provide species level information. The ability to identify the species identity of similar-sized individuals using only hydroacoustic data would greatly expand monitoring capabilities and further reduce the need for conventional sampling. In this study, wideband hydroacoustic technology was used in a mesocosm experiment to differentiate between free swimming, similar-sized individuals of two swim-bladdered species: whitefish (Coregonus wartmanni) and stickleback (Gasterosteus aculeatus). Individual targets were identified in echograms and variation in wideband acoustic responses among individuals, across different orientations, and between species was quantified and visually examined. Random forest classification was then used to classify individual targets of known species identity, and had an accuracy of 73.4% for the testing dataset. The results show that species can be identified with reasonable accuracy using wideband hydroacoustics. It is expected that further mesocosm and field studies will help determine capabilities and limitations for classifying additional species and monitoring fish communities. Hydroacoustic species differentiation may offer novel possibilities for fisheries managers and scientists, marking the next crucial step in non-invasive fish monitoring.
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spelling pubmed-81317092021-05-25 Differentiation of two swim bladdered fish species using next generation wideband hydroacoustics Gugele, Sarah M. Widmer, Marcus Baer, Jan DeWeber, J. Tyrell Balk, Helge Brinker, Alexander Sci Rep Article Monitoring fish populations in large, deep water bodies by conventional capture methodologies requires intensive fishing effort and often causes mass mortality of fish. Thus, it can be difficult to collect sufficient data using capture methods for understanding fine scale community dynamics associated with issues such as climate change or species invasion. Hydroacoustic monitoring is an alternative, less invasive technology that can collect higher resolution data over large temporal and spatial scales. Monitoring multiple species with hydroacoustics, however, usually requires conventional sampling to provide species level information. The ability to identify the species identity of similar-sized individuals using only hydroacoustic data would greatly expand monitoring capabilities and further reduce the need for conventional sampling. In this study, wideband hydroacoustic technology was used in a mesocosm experiment to differentiate between free swimming, similar-sized individuals of two swim-bladdered species: whitefish (Coregonus wartmanni) and stickleback (Gasterosteus aculeatus). Individual targets were identified in echograms and variation in wideband acoustic responses among individuals, across different orientations, and between species was quantified and visually examined. Random forest classification was then used to classify individual targets of known species identity, and had an accuracy of 73.4% for the testing dataset. The results show that species can be identified with reasonable accuracy using wideband hydroacoustics. It is expected that further mesocosm and field studies will help determine capabilities and limitations for classifying additional species and monitoring fish communities. Hydroacoustic species differentiation may offer novel possibilities for fisheries managers and scientists, marking the next crucial step in non-invasive fish monitoring. Nature Publishing Group UK 2021-05-18 /pmc/articles/PMC8131709/ /pubmed/34006900 http://dx.doi.org/10.1038/s41598-021-89941-7 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Gugele, Sarah M.
Widmer, Marcus
Baer, Jan
DeWeber, J. Tyrell
Balk, Helge
Brinker, Alexander
Differentiation of two swim bladdered fish species using next generation wideband hydroacoustics
title Differentiation of two swim bladdered fish species using next generation wideband hydroacoustics
title_full Differentiation of two swim bladdered fish species using next generation wideband hydroacoustics
title_fullStr Differentiation of two swim bladdered fish species using next generation wideband hydroacoustics
title_full_unstemmed Differentiation of two swim bladdered fish species using next generation wideband hydroacoustics
title_short Differentiation of two swim bladdered fish species using next generation wideband hydroacoustics
title_sort differentiation of two swim bladdered fish species using next generation wideband hydroacoustics
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8131709/
https://www.ncbi.nlm.nih.gov/pubmed/34006900
http://dx.doi.org/10.1038/s41598-021-89941-7
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