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A python code for automatic construction of Fischer plots using proxy data
Fischer plots are widely used in paleoenvironmental research as graphic representations of sea- and lake-level changes through mapping linearly corrected variation of accumulative cycle thickness over cycle number or stratum depth. Some kinds of paleoenvironmental proxy data (especially subsurface d...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8131744/ https://www.ncbi.nlm.nih.gov/pubmed/34006986 http://dx.doi.org/10.1038/s41598-021-90017-9 |
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author | Yang, Daming Huang, Yongjian Chen, Zongyang Huang, Qinghua Ren, Yanguang Wang, Chengshan |
author_facet | Yang, Daming Huang, Yongjian Chen, Zongyang Huang, Qinghua Ren, Yanguang Wang, Chengshan |
author_sort | Yang, Daming |
collection | PubMed |
description | Fischer plots are widely used in paleoenvironmental research as graphic representations of sea- and lake-level changes through mapping linearly corrected variation of accumulative cycle thickness over cycle number or stratum depth. Some kinds of paleoenvironmental proxy data (especially subsurface data, such as natural gamma-ray logging data), which preserve continuous cyclic signals and have been largely collected, are potential materials for constructing Fischer Plots. However, it is laborious to count the cycles preserved in these proxy data manually and map Fischer plots with these cycles. In this paper, we introduce an original open-source Python code “PyFISCHERPLOT” for constructing Fischer Plots in batches utilizing paleoenvironmental proxy data series. The principle of constructing Fischer plots based on proxy data, the data processing and usage of the PyFISCHERPLOT code and the application cases of the code are presented. The code is compared with existing methods for constructing Fischer plots. |
format | Online Article Text |
id | pubmed-8131744 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-81317442021-05-25 A python code for automatic construction of Fischer plots using proxy data Yang, Daming Huang, Yongjian Chen, Zongyang Huang, Qinghua Ren, Yanguang Wang, Chengshan Sci Rep Article Fischer plots are widely used in paleoenvironmental research as graphic representations of sea- and lake-level changes through mapping linearly corrected variation of accumulative cycle thickness over cycle number or stratum depth. Some kinds of paleoenvironmental proxy data (especially subsurface data, such as natural gamma-ray logging data), which preserve continuous cyclic signals and have been largely collected, are potential materials for constructing Fischer Plots. However, it is laborious to count the cycles preserved in these proxy data manually and map Fischer plots with these cycles. In this paper, we introduce an original open-source Python code “PyFISCHERPLOT” for constructing Fischer Plots in batches utilizing paleoenvironmental proxy data series. The principle of constructing Fischer plots based on proxy data, the data processing and usage of the PyFISCHERPLOT code and the application cases of the code are presented. The code is compared with existing methods for constructing Fischer plots. Nature Publishing Group UK 2021-05-18 /pmc/articles/PMC8131744/ /pubmed/34006986 http://dx.doi.org/10.1038/s41598-021-90017-9 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Yang, Daming Huang, Yongjian Chen, Zongyang Huang, Qinghua Ren, Yanguang Wang, Chengshan A python code for automatic construction of Fischer plots using proxy data |
title | A python code for automatic construction of Fischer plots using proxy data |
title_full | A python code for automatic construction of Fischer plots using proxy data |
title_fullStr | A python code for automatic construction of Fischer plots using proxy data |
title_full_unstemmed | A python code for automatic construction of Fischer plots using proxy data |
title_short | A python code for automatic construction of Fischer plots using proxy data |
title_sort | python code for automatic construction of fischer plots using proxy data |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8131744/ https://www.ncbi.nlm.nih.gov/pubmed/34006986 http://dx.doi.org/10.1038/s41598-021-90017-9 |
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