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A Preliminary Experience of Implementing Deep-Learning Based Auto-Segmentation in Head and Neck Cancer: A Study on Real-World Clinical Cases
PURPOSE: While artificial intelligence has shown great promise in organs-at-risk (OARs) auto segmentation for head and neck cancer (HNC) radiotherapy, to reach the level of clinical acceptance of this technology in real-world routine practice is still a challenge. The purpose of this study was to va...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8132944/ https://www.ncbi.nlm.nih.gov/pubmed/34026615 http://dx.doi.org/10.3389/fonc.2021.638197 |
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author | Zhong, Yang Yang, Yanju Fang, Yingtao Wang, Jiazhou Hu, Weigang |
author_facet | Zhong, Yang Yang, Yanju Fang, Yingtao Wang, Jiazhou Hu, Weigang |
author_sort | Zhong, Yang |
collection | PubMed |
description | PURPOSE: While artificial intelligence has shown great promise in organs-at-risk (OARs) auto segmentation for head and neck cancer (HNC) radiotherapy, to reach the level of clinical acceptance of this technology in real-world routine practice is still a challenge. The purpose of this study was to validate a U-net-based full convolutional neural network (CNN) for the automatic delineation of OARs of HNC, focusing on clinical implementation and evaluation. METHODS: In the first phase, the CNN was trained on 364 clinical HNC patients’ CT images with annotated contouring from routine clinical cases by different oncologists. The automated delineation accuracy was quantified using the Dice similarity coefficient (DSC) and 95% Hausdorff distance (HD). To assess efficiency, the time required to edit the auto-contours to a clinically acceptable standard was evaluated by a questionnaire. For subjective evaluation, expert oncologists (more than 10 years’ experience) were randomly presented with automated delineations or manual contours of 15 OARs for 30 patient cases. In the second phase, the network was retrained with an additional 300 patients, which were generated by pre-trained CNN and edited by oncologists until to meet clinical acceptance. RESULTS: Based on DSC, the CNN performed best for the spinal cord, brainstem, temporal lobe, eyes, optic nerve, parotid glands and larynx (DSC >0.7). Higher conformity for the OARs delineation was achieved by retraining our architecture, largest DSC improvement on oral cavity (0.53 to 0.93). Compared with the manual delineation time, after using auto-contouring, this duration was significantly shortened from hours to minutes. In the subjective evaluation, two observes showed an apparent inclination on automatic OARs contouring, even for relatively low DSC values. Most of the automated OARs segmentation can reach the clinical acceptance level compared to manual delineations. CONCLUSIONS: After retraining, the CNN developed for OARs automated delineation in HNC was proved to be more robust, efficiency and consistency in clinical practice. Deep learning-based auto-segmentation shows great potential to alleviate the labor-intensive contouring of OAR for radiotherapy treatment planning. |
format | Online Article Text |
id | pubmed-8132944 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-81329442021-05-20 A Preliminary Experience of Implementing Deep-Learning Based Auto-Segmentation in Head and Neck Cancer: A Study on Real-World Clinical Cases Zhong, Yang Yang, Yanju Fang, Yingtao Wang, Jiazhou Hu, Weigang Front Oncol Oncology PURPOSE: While artificial intelligence has shown great promise in organs-at-risk (OARs) auto segmentation for head and neck cancer (HNC) radiotherapy, to reach the level of clinical acceptance of this technology in real-world routine practice is still a challenge. The purpose of this study was to validate a U-net-based full convolutional neural network (CNN) for the automatic delineation of OARs of HNC, focusing on clinical implementation and evaluation. METHODS: In the first phase, the CNN was trained on 364 clinical HNC patients’ CT images with annotated contouring from routine clinical cases by different oncologists. The automated delineation accuracy was quantified using the Dice similarity coefficient (DSC) and 95% Hausdorff distance (HD). To assess efficiency, the time required to edit the auto-contours to a clinically acceptable standard was evaluated by a questionnaire. For subjective evaluation, expert oncologists (more than 10 years’ experience) were randomly presented with automated delineations or manual contours of 15 OARs for 30 patient cases. In the second phase, the network was retrained with an additional 300 patients, which were generated by pre-trained CNN and edited by oncologists until to meet clinical acceptance. RESULTS: Based on DSC, the CNN performed best for the spinal cord, brainstem, temporal lobe, eyes, optic nerve, parotid glands and larynx (DSC >0.7). Higher conformity for the OARs delineation was achieved by retraining our architecture, largest DSC improvement on oral cavity (0.53 to 0.93). Compared with the manual delineation time, after using auto-contouring, this duration was significantly shortened from hours to minutes. In the subjective evaluation, two observes showed an apparent inclination on automatic OARs contouring, even for relatively low DSC values. Most of the automated OARs segmentation can reach the clinical acceptance level compared to manual delineations. CONCLUSIONS: After retraining, the CNN developed for OARs automated delineation in HNC was proved to be more robust, efficiency and consistency in clinical practice. Deep learning-based auto-segmentation shows great potential to alleviate the labor-intensive contouring of OAR for radiotherapy treatment planning. Frontiers Media S.A. 2021-05-05 /pmc/articles/PMC8132944/ /pubmed/34026615 http://dx.doi.org/10.3389/fonc.2021.638197 Text en Copyright © 2021 Zhong, Yang, Fang, Wang and Hu https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Oncology Zhong, Yang Yang, Yanju Fang, Yingtao Wang, Jiazhou Hu, Weigang A Preliminary Experience of Implementing Deep-Learning Based Auto-Segmentation in Head and Neck Cancer: A Study on Real-World Clinical Cases |
title | A Preliminary Experience of Implementing Deep-Learning Based Auto-Segmentation in Head and Neck Cancer: A Study on Real-World Clinical Cases |
title_full | A Preliminary Experience of Implementing Deep-Learning Based Auto-Segmentation in Head and Neck Cancer: A Study on Real-World Clinical Cases |
title_fullStr | A Preliminary Experience of Implementing Deep-Learning Based Auto-Segmentation in Head and Neck Cancer: A Study on Real-World Clinical Cases |
title_full_unstemmed | A Preliminary Experience of Implementing Deep-Learning Based Auto-Segmentation in Head and Neck Cancer: A Study on Real-World Clinical Cases |
title_short | A Preliminary Experience of Implementing Deep-Learning Based Auto-Segmentation in Head and Neck Cancer: A Study on Real-World Clinical Cases |
title_sort | preliminary experience of implementing deep-learning based auto-segmentation in head and neck cancer: a study on real-world clinical cases |
topic | Oncology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8132944/ https://www.ncbi.nlm.nih.gov/pubmed/34026615 http://dx.doi.org/10.3389/fonc.2021.638197 |
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