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Simulation-to-real domain adaptation with teacher–student learning for endoscopic instrument segmentation

PURPOSE: Segmentation of surgical instruments in endoscopic video streams is essential for automated surgical scene understanding and process modeling. However, relying on fully supervised deep learning for this task is challenging because manual annotation occupies valuable time of the clinical exp...

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Autores principales: Sahu, Manish, Mukhopadhyay, Anirban, Zachow, Stefan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer International Publishing 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8134307/
https://www.ncbi.nlm.nih.gov/pubmed/33982232
http://dx.doi.org/10.1007/s11548-021-02383-4
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author Sahu, Manish
Mukhopadhyay, Anirban
Zachow, Stefan
author_facet Sahu, Manish
Mukhopadhyay, Anirban
Zachow, Stefan
author_sort Sahu, Manish
collection PubMed
description PURPOSE: Segmentation of surgical instruments in endoscopic video streams is essential for automated surgical scene understanding and process modeling. However, relying on fully supervised deep learning for this task is challenging because manual annotation occupies valuable time of the clinical experts. METHODS: We introduce a teacher–student learning approach that learns jointly from annotated simulation data and unlabeled real data to tackle the challenges in simulation-to-real unsupervised domain adaptation for endoscopic image segmentation. RESULTS: Empirical results on three datasets highlight the effectiveness of the proposed framework over current approaches for the endoscopic instrument segmentation task. Additionally, we provide analysis of major factors affecting the performance on all datasets to highlight the strengths and failure modes of our approach. CONCLUSIONS: We show that our proposed approach can successfully exploit the unlabeled real endoscopic video frames and improve generalization performance over pure simulation-based training and the previous state-of-the-art. This takes us one step closer to effective segmentation of surgical instrument in the annotation scarce setting.
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spelling pubmed-81343072021-05-24 Simulation-to-real domain adaptation with teacher–student learning for endoscopic instrument segmentation Sahu, Manish Mukhopadhyay, Anirban Zachow, Stefan Int J Comput Assist Radiol Surg Original Article PURPOSE: Segmentation of surgical instruments in endoscopic video streams is essential for automated surgical scene understanding and process modeling. However, relying on fully supervised deep learning for this task is challenging because manual annotation occupies valuable time of the clinical experts. METHODS: We introduce a teacher–student learning approach that learns jointly from annotated simulation data and unlabeled real data to tackle the challenges in simulation-to-real unsupervised domain adaptation for endoscopic image segmentation. RESULTS: Empirical results on three datasets highlight the effectiveness of the proposed framework over current approaches for the endoscopic instrument segmentation task. Additionally, we provide analysis of major factors affecting the performance on all datasets to highlight the strengths and failure modes of our approach. CONCLUSIONS: We show that our proposed approach can successfully exploit the unlabeled real endoscopic video frames and improve generalization performance over pure simulation-based training and the previous state-of-the-art. This takes us one step closer to effective segmentation of surgical instrument in the annotation scarce setting. Springer International Publishing 2021-05-12 2021 /pmc/articles/PMC8134307/ /pubmed/33982232 http://dx.doi.org/10.1007/s11548-021-02383-4 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Original Article
Sahu, Manish
Mukhopadhyay, Anirban
Zachow, Stefan
Simulation-to-real domain adaptation with teacher–student learning for endoscopic instrument segmentation
title Simulation-to-real domain adaptation with teacher–student learning for endoscopic instrument segmentation
title_full Simulation-to-real domain adaptation with teacher–student learning for endoscopic instrument segmentation
title_fullStr Simulation-to-real domain adaptation with teacher–student learning for endoscopic instrument segmentation
title_full_unstemmed Simulation-to-real domain adaptation with teacher–student learning for endoscopic instrument segmentation
title_short Simulation-to-real domain adaptation with teacher–student learning for endoscopic instrument segmentation
title_sort simulation-to-real domain adaptation with teacher–student learning for endoscopic instrument segmentation
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8134307/
https://www.ncbi.nlm.nih.gov/pubmed/33982232
http://dx.doi.org/10.1007/s11548-021-02383-4
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