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Towards markerless surgical tool and hand pose estimation

PURPOSE: : Tracking of tools and surgical activity is becoming more and more important in the context of computer assisted surgery. In this work, we present a data generation framework, dataset and baseline methods to facilitate further research in the direction of markerless hand and instrument pos...

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Autores principales: Hein, Jonas, Seibold, Matthias, Bogo, Federica, Farshad, Mazda, Pollefeys, Marc, Fürnstahl, Philipp, Navab, Nassir
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer International Publishing 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8134312/
https://www.ncbi.nlm.nih.gov/pubmed/33881732
http://dx.doi.org/10.1007/s11548-021-02369-2
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author Hein, Jonas
Seibold, Matthias
Bogo, Federica
Farshad, Mazda
Pollefeys, Marc
Fürnstahl, Philipp
Navab, Nassir
author_facet Hein, Jonas
Seibold, Matthias
Bogo, Federica
Farshad, Mazda
Pollefeys, Marc
Fürnstahl, Philipp
Navab, Nassir
author_sort Hein, Jonas
collection PubMed
description PURPOSE: : Tracking of tools and surgical activity is becoming more and more important in the context of computer assisted surgery. In this work, we present a data generation framework, dataset and baseline methods to facilitate further research in the direction of markerless hand and instrument pose estimation in realistic surgical scenarios. METHODS: : We developed a rendering pipeline to create inexpensive and realistic synthetic data for model pretraining. Subsequently, we propose a pipeline to capture and label real data with hand and object pose ground truth in an experimental setup to gather high-quality real data. We furthermore present three state-of-the-art RGB-based pose estimation baselines. RESULTS: : We evaluate three baseline models on the proposed datasets. The best performing baseline achieves an average tool 3D vertex error of 16.7 mm on synthetic data as well as 13.8 mm on real data which is comparable to the state-of-the art in RGB-based hand/object pose estimation. CONCLUSION: : To the best of our knowledge, we propose the first synthetic and real data generation pipelines to generate hand and object pose labels for open surgery. We present three baseline models for RGB based object and object/hand pose estimation based on RGB frames. Our realistic synthetic data generation pipeline may contribute to overcome the data bottleneck in the surgical domain and can easily be transferred to other medical applications. SUPPLEMENTARY INFORMATION: The online version supplementary material available at 10.1007/s11548-021-02369-2.
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spelling pubmed-81343122021-05-24 Towards markerless surgical tool and hand pose estimation Hein, Jonas Seibold, Matthias Bogo, Federica Farshad, Mazda Pollefeys, Marc Fürnstahl, Philipp Navab, Nassir Int J Comput Assist Radiol Surg Original Article PURPOSE: : Tracking of tools and surgical activity is becoming more and more important in the context of computer assisted surgery. In this work, we present a data generation framework, dataset and baseline methods to facilitate further research in the direction of markerless hand and instrument pose estimation in realistic surgical scenarios. METHODS: : We developed a rendering pipeline to create inexpensive and realistic synthetic data for model pretraining. Subsequently, we propose a pipeline to capture and label real data with hand and object pose ground truth in an experimental setup to gather high-quality real data. We furthermore present three state-of-the-art RGB-based pose estimation baselines. RESULTS: : We evaluate three baseline models on the proposed datasets. The best performing baseline achieves an average tool 3D vertex error of 16.7 mm on synthetic data as well as 13.8 mm on real data which is comparable to the state-of-the art in RGB-based hand/object pose estimation. CONCLUSION: : To the best of our knowledge, we propose the first synthetic and real data generation pipelines to generate hand and object pose labels for open surgery. We present three baseline models for RGB based object and object/hand pose estimation based on RGB frames. Our realistic synthetic data generation pipeline may contribute to overcome the data bottleneck in the surgical domain and can easily be transferred to other medical applications. SUPPLEMENTARY INFORMATION: The online version supplementary material available at 10.1007/s11548-021-02369-2. Springer International Publishing 2021-04-21 2021 /pmc/articles/PMC8134312/ /pubmed/33881732 http://dx.doi.org/10.1007/s11548-021-02369-2 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Original Article
Hein, Jonas
Seibold, Matthias
Bogo, Federica
Farshad, Mazda
Pollefeys, Marc
Fürnstahl, Philipp
Navab, Nassir
Towards markerless surgical tool and hand pose estimation
title Towards markerless surgical tool and hand pose estimation
title_full Towards markerless surgical tool and hand pose estimation
title_fullStr Towards markerless surgical tool and hand pose estimation
title_full_unstemmed Towards markerless surgical tool and hand pose estimation
title_short Towards markerless surgical tool and hand pose estimation
title_sort towards markerless surgical tool and hand pose estimation
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8134312/
https://www.ncbi.nlm.nih.gov/pubmed/33881732
http://dx.doi.org/10.1007/s11548-021-02369-2
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