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ATP hydrolysis and nucleotide exit enhance maltose translocation in the MalFGK(2)E importer

ATP binding cassette (ABC) transporters employ ATP hydrolysis to harness substrate translocation across membranes. The Escherichia coli MalFGK(2)E maltose importer is an example of a type I ABC importer and a model system for this class of ABC transporters. The MalFGK(2)E importer is responsible for...

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Autores principales: Abreu, Bárbara, Cruz, Carlos, Oliveira, A. Sofia F., Soares, Cláudio M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8134467/
https://www.ncbi.nlm.nih.gov/pubmed/34012037
http://dx.doi.org/10.1038/s41598-021-89556-y
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author Abreu, Bárbara
Cruz, Carlos
Oliveira, A. Sofia F.
Soares, Cláudio M.
author_facet Abreu, Bárbara
Cruz, Carlos
Oliveira, A. Sofia F.
Soares, Cláudio M.
author_sort Abreu, Bárbara
collection PubMed
description ATP binding cassette (ABC) transporters employ ATP hydrolysis to harness substrate translocation across membranes. The Escherichia coli MalFGK(2)E maltose importer is an example of a type I ABC importer and a model system for this class of ABC transporters. The MalFGK(2)E importer is responsible for the intake of malto-oligossacharides in E.coli. Despite being extensively studied, little is known about the effect of ATP hydrolysis and nucleotide exit on substrate transport. In this work, we studied this phenomenon using extensive molecular dynamics simulations (MD) along with potential of mean force calculations of maltose transport across the pore, in the pre-hydrolysis, post-hydrolysis and nucleotide-free states. We concluded that ATP hydrolysis and nucleotide exit trigger conformational changes that result in the decrease of energetic barriers to maltose translocation towards the cytoplasm, with a concomitant increase of the energy barrier in the periplasmic side of the pore, contributing for the irreversibility of the process. We also identified key residues that aid in positioning and orientation of maltose, as well as a novel binding pocket for maltose in MalG. Additionally, ATP hydrolysis leads to conformations similar to the nucleotide-free state. This study shows the contribution of ATP hydrolysis and nucleotide exit in the transport cycle, shedding light on ABC type I importer mechanisms.
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spelling pubmed-81344672021-05-25 ATP hydrolysis and nucleotide exit enhance maltose translocation in the MalFGK(2)E importer Abreu, Bárbara Cruz, Carlos Oliveira, A. Sofia F. Soares, Cláudio M. Sci Rep Article ATP binding cassette (ABC) transporters employ ATP hydrolysis to harness substrate translocation across membranes. The Escherichia coli MalFGK(2)E maltose importer is an example of a type I ABC importer and a model system for this class of ABC transporters. The MalFGK(2)E importer is responsible for the intake of malto-oligossacharides in E.coli. Despite being extensively studied, little is known about the effect of ATP hydrolysis and nucleotide exit on substrate transport. In this work, we studied this phenomenon using extensive molecular dynamics simulations (MD) along with potential of mean force calculations of maltose transport across the pore, in the pre-hydrolysis, post-hydrolysis and nucleotide-free states. We concluded that ATP hydrolysis and nucleotide exit trigger conformational changes that result in the decrease of energetic barriers to maltose translocation towards the cytoplasm, with a concomitant increase of the energy barrier in the periplasmic side of the pore, contributing for the irreversibility of the process. We also identified key residues that aid in positioning and orientation of maltose, as well as a novel binding pocket for maltose in MalG. Additionally, ATP hydrolysis leads to conformations similar to the nucleotide-free state. This study shows the contribution of ATP hydrolysis and nucleotide exit in the transport cycle, shedding light on ABC type I importer mechanisms. Nature Publishing Group UK 2021-05-19 /pmc/articles/PMC8134467/ /pubmed/34012037 http://dx.doi.org/10.1038/s41598-021-89556-y Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Abreu, Bárbara
Cruz, Carlos
Oliveira, A. Sofia F.
Soares, Cláudio M.
ATP hydrolysis and nucleotide exit enhance maltose translocation in the MalFGK(2)E importer
title ATP hydrolysis and nucleotide exit enhance maltose translocation in the MalFGK(2)E importer
title_full ATP hydrolysis and nucleotide exit enhance maltose translocation in the MalFGK(2)E importer
title_fullStr ATP hydrolysis and nucleotide exit enhance maltose translocation in the MalFGK(2)E importer
title_full_unstemmed ATP hydrolysis and nucleotide exit enhance maltose translocation in the MalFGK(2)E importer
title_short ATP hydrolysis and nucleotide exit enhance maltose translocation in the MalFGK(2)E importer
title_sort atp hydrolysis and nucleotide exit enhance maltose translocation in the malfgk(2)e importer
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8134467/
https://www.ncbi.nlm.nih.gov/pubmed/34012037
http://dx.doi.org/10.1038/s41598-021-89556-y
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