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SARS-CoV-2 Transmission in Alberta, British Columbia, and Ontario, Canada, December 25, 2019, to December 1, 2020

OBJECTIVE: This study aimed to investigate coronavirus disease (COVID-19) epidemiology in Alberta, British Columbia, and Ontario, Canada. METHODS: Using data through December 1, 2020, we estimated time-varying reproduction number, R (t), using EpiEstim package in R, and calculated incidence rate rat...

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Autores principales: Fung, Isaac Chun-Hai, Hung, Yuen Wai, Ofori, Sylvia K., Muniz-Rodriguez, Kamalich, Lai, Po-Ying, Chowell, Gerardo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cambridge University Press 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8134904/
https://www.ncbi.nlm.nih.gov/pubmed/33762027
http://dx.doi.org/10.1017/dmp.2021.78
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author Fung, Isaac Chun-Hai
Hung, Yuen Wai
Ofori, Sylvia K.
Muniz-Rodriguez, Kamalich
Lai, Po-Ying
Chowell, Gerardo
author_facet Fung, Isaac Chun-Hai
Hung, Yuen Wai
Ofori, Sylvia K.
Muniz-Rodriguez, Kamalich
Lai, Po-Ying
Chowell, Gerardo
author_sort Fung, Isaac Chun-Hai
collection PubMed
description OBJECTIVE: This study aimed to investigate coronavirus disease (COVID-19) epidemiology in Alberta, British Columbia, and Ontario, Canada. METHODS: Using data through December 1, 2020, we estimated time-varying reproduction number, R (t), using EpiEstim package in R, and calculated incidence rate ratios (IRR) across the 3 provinces. RESULTS: In Ontario, 76% (92 745/121 745) of cases were in Toronto, Peel, York, Ottawa, and Durham; in Alberta, 82% (49 878/61 169) in Calgary and Edmonton; in British Columbia, 90% (31 142/34 699) in Fraser and Vancouver Coastal. Across 3 provinces, R (t) dropped to ≤ 1 after April. In Ontario, R (t) would remain < 1 in April if congregate-setting-associated cases were excluded. Over summer, R (t) maintained < 1 in Ontario, ~1 in British Columbia, and ~1 in Alberta, except early July when R (t) was > 1. In all 3 provinces, R (t) was > 1, reflecting surges in case count from September through November. Compared with British Columbia (684.2 cases per 100 000), Alberta (IRR = 2.0; 1399.3 cases per 100 000) and Ontario (IRR = 1.2; 835.8 cases per 100 000) had a higher cumulative case count per 100 000 population. CONCLUSIONS: Alberta and Ontario had a higher incidence rate than British Columbia, but R (t) trajectories were similar across all 3 provinces.
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spelling pubmed-81349042021-05-21 SARS-CoV-2 Transmission in Alberta, British Columbia, and Ontario, Canada, December 25, 2019, to December 1, 2020 Fung, Isaac Chun-Hai Hung, Yuen Wai Ofori, Sylvia K. Muniz-Rodriguez, Kamalich Lai, Po-Ying Chowell, Gerardo Disaster Med Public Health Prep Original Research OBJECTIVE: This study aimed to investigate coronavirus disease (COVID-19) epidemiology in Alberta, British Columbia, and Ontario, Canada. METHODS: Using data through December 1, 2020, we estimated time-varying reproduction number, R (t), using EpiEstim package in R, and calculated incidence rate ratios (IRR) across the 3 provinces. RESULTS: In Ontario, 76% (92 745/121 745) of cases were in Toronto, Peel, York, Ottawa, and Durham; in Alberta, 82% (49 878/61 169) in Calgary and Edmonton; in British Columbia, 90% (31 142/34 699) in Fraser and Vancouver Coastal. Across 3 provinces, R (t) dropped to ≤ 1 after April. In Ontario, R (t) would remain < 1 in April if congregate-setting-associated cases were excluded. Over summer, R (t) maintained < 1 in Ontario, ~1 in British Columbia, and ~1 in Alberta, except early July when R (t) was > 1. In all 3 provinces, R (t) was > 1, reflecting surges in case count from September through November. Compared with British Columbia (684.2 cases per 100 000), Alberta (IRR = 2.0; 1399.3 cases per 100 000) and Ontario (IRR = 1.2; 835.8 cases per 100 000) had a higher cumulative case count per 100 000 population. CONCLUSIONS: Alberta and Ontario had a higher incidence rate than British Columbia, but R (t) trajectories were similar across all 3 provinces. Cambridge University Press 2021-03-25 /pmc/articles/PMC8134904/ /pubmed/33762027 http://dx.doi.org/10.1017/dmp.2021.78 Text en © Society for Disaster Medicine and Public Health, Inc. 2021 https://creativecommons.org/licenses/by/4.0/This is an Open Access article, distributed under the terms of the Creative Commons Attribution licence (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted re-use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Research
Fung, Isaac Chun-Hai
Hung, Yuen Wai
Ofori, Sylvia K.
Muniz-Rodriguez, Kamalich
Lai, Po-Ying
Chowell, Gerardo
SARS-CoV-2 Transmission in Alberta, British Columbia, and Ontario, Canada, December 25, 2019, to December 1, 2020
title SARS-CoV-2 Transmission in Alberta, British Columbia, and Ontario, Canada, December 25, 2019, to December 1, 2020
title_full SARS-CoV-2 Transmission in Alberta, British Columbia, and Ontario, Canada, December 25, 2019, to December 1, 2020
title_fullStr SARS-CoV-2 Transmission in Alberta, British Columbia, and Ontario, Canada, December 25, 2019, to December 1, 2020
title_full_unstemmed SARS-CoV-2 Transmission in Alberta, British Columbia, and Ontario, Canada, December 25, 2019, to December 1, 2020
title_short SARS-CoV-2 Transmission in Alberta, British Columbia, and Ontario, Canada, December 25, 2019, to December 1, 2020
title_sort sars-cov-2 transmission in alberta, british columbia, and ontario, canada, december 25, 2019, to december 1, 2020
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8134904/
https://www.ncbi.nlm.nih.gov/pubmed/33762027
http://dx.doi.org/10.1017/dmp.2021.78
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