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A machine learning prediction model for waiting time to kidney transplant

BACKGROUND: Predicting waiting time for a deceased donor kidney transplant can help patients and clinicians to discuss management and contribute to a more efficient use of resources. This study aimed at developing a predictor model to estimate time on a kidney transplant waiting list using a machine...

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Autores principales: Sapiertein Silva, Juliana Feiman, Ferreira, Gustavo Fernandes, Perosa, Marcelo, Nga, Hong Si, de Andrade, Luis Gustavo Modelli
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8136711/
https://www.ncbi.nlm.nih.gov/pubmed/34015020
http://dx.doi.org/10.1371/journal.pone.0252069
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author Sapiertein Silva, Juliana Feiman
Ferreira, Gustavo Fernandes
Perosa, Marcelo
Nga, Hong Si
de Andrade, Luis Gustavo Modelli
author_facet Sapiertein Silva, Juliana Feiman
Ferreira, Gustavo Fernandes
Perosa, Marcelo
Nga, Hong Si
de Andrade, Luis Gustavo Modelli
author_sort Sapiertein Silva, Juliana Feiman
collection PubMed
description BACKGROUND: Predicting waiting time for a deceased donor kidney transplant can help patients and clinicians to discuss management and contribute to a more efficient use of resources. This study aimed at developing a predictor model to estimate time on a kidney transplant waiting list using a machine learning approach. METHODS: A retrospective cohort study including data of patients registered, between January 1, 2000 and December 31, 2017, in the waiting list of São Paulo State Organ Allocation System (SP-OAS) /Brazil. Data were randomly divided into two groups: 75% for training and 25% for testing. A Cox regression model was fitted with deceased donor transplant as the outcome. Sensitivity analyses were performed using different Cox models. Cox hazard ratios were used to develop the risk-prediction equations. RESULTS: Of 54,055 records retrieved, 48,153 registries were included in the final analysis. During the study period, approximately 1/3 of the patients were transplanted with a deceased donor. The major characteristics associated with changes in the likelihood of transplantation were age, subregion, cPRA, and frequency of HLA-DR, -B and -A. The model developed was able to predict waiting time with good agreement in internal validation (c-index = 0.70). CONCLUSION: The kidney transplant waiting time calculator developed shows good predictive performance and provides information that may be valuable in assisting candidates and their providers. Moreover, it can significantly improve the use of economic resources and the management of patient care before transplant.
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spelling pubmed-81367112021-06-02 A machine learning prediction model for waiting time to kidney transplant Sapiertein Silva, Juliana Feiman Ferreira, Gustavo Fernandes Perosa, Marcelo Nga, Hong Si de Andrade, Luis Gustavo Modelli PLoS One Research Article BACKGROUND: Predicting waiting time for a deceased donor kidney transplant can help patients and clinicians to discuss management and contribute to a more efficient use of resources. This study aimed at developing a predictor model to estimate time on a kidney transplant waiting list using a machine learning approach. METHODS: A retrospective cohort study including data of patients registered, between January 1, 2000 and December 31, 2017, in the waiting list of São Paulo State Organ Allocation System (SP-OAS) /Brazil. Data were randomly divided into two groups: 75% for training and 25% for testing. A Cox regression model was fitted with deceased donor transplant as the outcome. Sensitivity analyses were performed using different Cox models. Cox hazard ratios were used to develop the risk-prediction equations. RESULTS: Of 54,055 records retrieved, 48,153 registries were included in the final analysis. During the study period, approximately 1/3 of the patients were transplanted with a deceased donor. The major characteristics associated with changes in the likelihood of transplantation were age, subregion, cPRA, and frequency of HLA-DR, -B and -A. The model developed was able to predict waiting time with good agreement in internal validation (c-index = 0.70). CONCLUSION: The kidney transplant waiting time calculator developed shows good predictive performance and provides information that may be valuable in assisting candidates and their providers. Moreover, it can significantly improve the use of economic resources and the management of patient care before transplant. Public Library of Science 2021-05-20 /pmc/articles/PMC8136711/ /pubmed/34015020 http://dx.doi.org/10.1371/journal.pone.0252069 Text en © 2021 Sapiertein Silva et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Sapiertein Silva, Juliana Feiman
Ferreira, Gustavo Fernandes
Perosa, Marcelo
Nga, Hong Si
de Andrade, Luis Gustavo Modelli
A machine learning prediction model for waiting time to kidney transplant
title A machine learning prediction model for waiting time to kidney transplant
title_full A machine learning prediction model for waiting time to kidney transplant
title_fullStr A machine learning prediction model for waiting time to kidney transplant
title_full_unstemmed A machine learning prediction model for waiting time to kidney transplant
title_short A machine learning prediction model for waiting time to kidney transplant
title_sort machine learning prediction model for waiting time to kidney transplant
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8136711/
https://www.ncbi.nlm.nih.gov/pubmed/34015020
http://dx.doi.org/10.1371/journal.pone.0252069
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