Cargando…
Prognostic Value and Related Regulatory Networks of MRPL15 in Non-Small-Cell Lung Cancer
BACKGROUND: Mitochondrial ribosomal protein L15 (MRPL15), a member of mitochondrial ribosomal proteins whose abnormal expression is related to tumorigenesis. However, the prognostic value and regulatory mechanisms of MRPL15 in non-small-cell lung cancer (NSCLC) remain unclear. METHODS: GEPIA, ONCOMI...
Autores principales: | , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8138120/ https://www.ncbi.nlm.nih.gov/pubmed/34026630 http://dx.doi.org/10.3389/fonc.2021.656172 |
_version_ | 1783695746899378176 |
---|---|
author | Zeng, Yangyang Shi, Yingying Xu, Lu Zeng, Yulan Cui, Xiao Wang, Yuan Yang, Ningning Zhou, Fuxiang Zhou, Yunfeng |
author_facet | Zeng, Yangyang Shi, Yingying Xu, Lu Zeng, Yulan Cui, Xiao Wang, Yuan Yang, Ningning Zhou, Fuxiang Zhou, Yunfeng |
author_sort | Zeng, Yangyang |
collection | PubMed |
description | BACKGROUND: Mitochondrial ribosomal protein L15 (MRPL15), a member of mitochondrial ribosomal proteins whose abnormal expression is related to tumorigenesis. However, the prognostic value and regulatory mechanisms of MRPL15 in non-small-cell lung cancer (NSCLC) remain unclear. METHODS: GEPIA, ONCOMINE, Gene Expression Omnibus (GEO), UALCAN, Kaplan–Meier plotter, PrognoScan, LinkedOmics and GeneMANIA database were utilized to explore the expression and prognostic value of MRPL15 in NSCLC. Additionally, immune infiltration patterns were evaluated via ESTIMATE algorithm and TISIDB database. Furthermore, the expression and prognostic value of MRPL15 in lung cancer were validated via immunohistochemistry (IHC) assays. RESULTS: In NSCLC, multiple cohorts including GEPIA, ONCOMINE and 8 GEO series (GSE8569, GSE101929, GSE33532, GSE27262, GSE21933, GSE19804, GSE19188, GSE18842) described that MRPL15 was up-regulated. Moreover, MRPL15 was notably linked to gender, clinical stage, lymph node status and the TP53 mutation status. And patients with high MRPL15 expression showed poor overall survival (OS), progression-free survival (PFS), disease-free survival (DFS) and relapse-free survival (RFS) in NSCLC. Then, functional network analysis suggested that MRPL15 participated in metabolism-related pathways, DNA replication and cell cycle signaling via pathways involving several kinases, miRNAs and transcription factors. Additionally, it was found that MRPL15 expression was negatively related to immune infiltration, including immune scores, stromal scores and several tumor-infiltrating lymphocytes (TILs). Furthermore, IHC results further confirmed the high MRPL15 expression and its prognostic potential in lung cancer. CONCLUSIONS: These findings demonstrate that high MRPL15 expression indicates poor prognosis in NSCLC and reveal potential regulatory networks as well as the negative relationship with immune infiltration. Thus, MRPL15 may be an attractive predictor and therapeutic strategy for NSCLC. |
format | Online Article Text |
id | pubmed-8138120 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-81381202021-05-22 Prognostic Value and Related Regulatory Networks of MRPL15 in Non-Small-Cell Lung Cancer Zeng, Yangyang Shi, Yingying Xu, Lu Zeng, Yulan Cui, Xiao Wang, Yuan Yang, Ningning Zhou, Fuxiang Zhou, Yunfeng Front Oncol Oncology BACKGROUND: Mitochondrial ribosomal protein L15 (MRPL15), a member of mitochondrial ribosomal proteins whose abnormal expression is related to tumorigenesis. However, the prognostic value and regulatory mechanisms of MRPL15 in non-small-cell lung cancer (NSCLC) remain unclear. METHODS: GEPIA, ONCOMINE, Gene Expression Omnibus (GEO), UALCAN, Kaplan–Meier plotter, PrognoScan, LinkedOmics and GeneMANIA database were utilized to explore the expression and prognostic value of MRPL15 in NSCLC. Additionally, immune infiltration patterns were evaluated via ESTIMATE algorithm and TISIDB database. Furthermore, the expression and prognostic value of MRPL15 in lung cancer were validated via immunohistochemistry (IHC) assays. RESULTS: In NSCLC, multiple cohorts including GEPIA, ONCOMINE and 8 GEO series (GSE8569, GSE101929, GSE33532, GSE27262, GSE21933, GSE19804, GSE19188, GSE18842) described that MRPL15 was up-regulated. Moreover, MRPL15 was notably linked to gender, clinical stage, lymph node status and the TP53 mutation status. And patients with high MRPL15 expression showed poor overall survival (OS), progression-free survival (PFS), disease-free survival (DFS) and relapse-free survival (RFS) in NSCLC. Then, functional network analysis suggested that MRPL15 participated in metabolism-related pathways, DNA replication and cell cycle signaling via pathways involving several kinases, miRNAs and transcription factors. Additionally, it was found that MRPL15 expression was negatively related to immune infiltration, including immune scores, stromal scores and several tumor-infiltrating lymphocytes (TILs). Furthermore, IHC results further confirmed the high MRPL15 expression and its prognostic potential in lung cancer. CONCLUSIONS: These findings demonstrate that high MRPL15 expression indicates poor prognosis in NSCLC and reveal potential regulatory networks as well as the negative relationship with immune infiltration. Thus, MRPL15 may be an attractive predictor and therapeutic strategy for NSCLC. Frontiers Media S.A. 2021-05-07 /pmc/articles/PMC8138120/ /pubmed/34026630 http://dx.doi.org/10.3389/fonc.2021.656172 Text en Copyright © 2021 Zeng, Shi, Xu, Zeng, Cui, Wang, Yang, Zhou and Zhou https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Oncology Zeng, Yangyang Shi, Yingying Xu, Lu Zeng, Yulan Cui, Xiao Wang, Yuan Yang, Ningning Zhou, Fuxiang Zhou, Yunfeng Prognostic Value and Related Regulatory Networks of MRPL15 in Non-Small-Cell Lung Cancer |
title | Prognostic Value and Related Regulatory Networks of MRPL15 in Non-Small-Cell Lung Cancer |
title_full | Prognostic Value and Related Regulatory Networks of MRPL15 in Non-Small-Cell Lung Cancer |
title_fullStr | Prognostic Value and Related Regulatory Networks of MRPL15 in Non-Small-Cell Lung Cancer |
title_full_unstemmed | Prognostic Value and Related Regulatory Networks of MRPL15 in Non-Small-Cell Lung Cancer |
title_short | Prognostic Value and Related Regulatory Networks of MRPL15 in Non-Small-Cell Lung Cancer |
title_sort | prognostic value and related regulatory networks of mrpl15 in non-small-cell lung cancer |
topic | Oncology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8138120/ https://www.ncbi.nlm.nih.gov/pubmed/34026630 http://dx.doi.org/10.3389/fonc.2021.656172 |
work_keys_str_mv | AT zengyangyang prognosticvalueandrelatedregulatorynetworksofmrpl15innonsmallcelllungcancer AT shiyingying prognosticvalueandrelatedregulatorynetworksofmrpl15innonsmallcelllungcancer AT xulu prognosticvalueandrelatedregulatorynetworksofmrpl15innonsmallcelllungcancer AT zengyulan prognosticvalueandrelatedregulatorynetworksofmrpl15innonsmallcelllungcancer AT cuixiao prognosticvalueandrelatedregulatorynetworksofmrpl15innonsmallcelllungcancer AT wangyuan prognosticvalueandrelatedregulatorynetworksofmrpl15innonsmallcelllungcancer AT yangningning prognosticvalueandrelatedregulatorynetworksofmrpl15innonsmallcelllungcancer AT zhoufuxiang prognosticvalueandrelatedregulatorynetworksofmrpl15innonsmallcelllungcancer AT zhouyunfeng prognosticvalueandrelatedregulatorynetworksofmrpl15innonsmallcelllungcancer |