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Learnings From Precision Clinical Trial Matching for Oncology Patients Who Received NGS Testing
Tumor next-generation sequencing reports typically generate trial recommendations for patients based on their diagnosis and genomic profile. However, these require additional refinement and prescreening, which can add to physician burden. We wanted to use human prescreening efforts to efficiently re...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Wolters Kluwer Health
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8140789/ https://www.ncbi.nlm.nih.gov/pubmed/33625867 http://dx.doi.org/10.1200/CCI.20.00142 |
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author | Jain, Neha M. Culley, Alison Micheel, Christine M. Osterman, Travis J. Levy, Mia A. |
author_facet | Jain, Neha M. Culley, Alison Micheel, Christine M. Osterman, Travis J. Levy, Mia A. |
author_sort | Jain, Neha M. |
collection | PubMed |
description | Tumor next-generation sequencing reports typically generate trial recommendations for patients based on their diagnosis and genomic profile. However, these require additional refinement and prescreening, which can add to physician burden. We wanted to use human prescreening efforts to efficiently refine these trial options and also elucidate the high-value parameters that have a major impact on efficient trial matching. METHODS: Clinical trial recommendations were generated based on diagnosis and biomarker criteria using an informatics platform and were further refined by manual prescreening. The refined results were then compared with the initial trial recommendations and the reasons for false-positive matches were evaluated. RESULTS: Manual prescreening significantly reduced the number of false positives from the informatics generated trial recommendations, as expected. We found that trial-specific criteria, especially recruiting status for individual trial arms, were a high value parameter and led to the largest number of automated false-positive matches. CONCLUSION: Reflex clinical trial matching approaches that refine trial recommendations based on the clinical details as well as trial-specific criteria have the potential to help alleviate physician burden for selecting the most appropriate trial for their patient. Investing in publicly available resources that capture the recruiting status of a trial at the cohort or arm level would, therefore, allow us to make meaningful contributions to increase the clinical trial enrollments by eliminating false positives. |
format | Online Article Text |
id | pubmed-8140789 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Wolters Kluwer Health |
record_format | MEDLINE/PubMed |
spelling | pubmed-81407892022-02-24 Learnings From Precision Clinical Trial Matching for Oncology Patients Who Received NGS Testing Jain, Neha M. Culley, Alison Micheel, Christine M. Osterman, Travis J. Levy, Mia A. JCO Clin Cancer Inform ORIGINAL REPORTS Tumor next-generation sequencing reports typically generate trial recommendations for patients based on their diagnosis and genomic profile. However, these require additional refinement and prescreening, which can add to physician burden. We wanted to use human prescreening efforts to efficiently refine these trial options and also elucidate the high-value parameters that have a major impact on efficient trial matching. METHODS: Clinical trial recommendations were generated based on diagnosis and biomarker criteria using an informatics platform and were further refined by manual prescreening. The refined results were then compared with the initial trial recommendations and the reasons for false-positive matches were evaluated. RESULTS: Manual prescreening significantly reduced the number of false positives from the informatics generated trial recommendations, as expected. We found that trial-specific criteria, especially recruiting status for individual trial arms, were a high value parameter and led to the largest number of automated false-positive matches. CONCLUSION: Reflex clinical trial matching approaches that refine trial recommendations based on the clinical details as well as trial-specific criteria have the potential to help alleviate physician burden for selecting the most appropriate trial for their patient. Investing in publicly available resources that capture the recruiting status of a trial at the cohort or arm level would, therefore, allow us to make meaningful contributions to increase the clinical trial enrollments by eliminating false positives. Wolters Kluwer Health 2021-02-24 /pmc/articles/PMC8140789/ /pubmed/33625867 http://dx.doi.org/10.1200/CCI.20.00142 Text en © 2021 by American Society of Clinical Oncology https://creativecommons.org/licenses/by-nc-nd/4.0/Creative Commons Attribution Non-Commercial No Derivatives 4.0 License: https://creativecommons.org/licenses/by-nc-nd/4.0/ |
spellingShingle | ORIGINAL REPORTS Jain, Neha M. Culley, Alison Micheel, Christine M. Osterman, Travis J. Levy, Mia A. Learnings From Precision Clinical Trial Matching for Oncology Patients Who Received NGS Testing |
title | Learnings From Precision Clinical Trial Matching for Oncology Patients Who Received NGS Testing |
title_full | Learnings From Precision Clinical Trial Matching for Oncology Patients Who Received NGS Testing |
title_fullStr | Learnings From Precision Clinical Trial Matching for Oncology Patients Who Received NGS Testing |
title_full_unstemmed | Learnings From Precision Clinical Trial Matching for Oncology Patients Who Received NGS Testing |
title_short | Learnings From Precision Clinical Trial Matching for Oncology Patients Who Received NGS Testing |
title_sort | learnings from precision clinical trial matching for oncology patients who received ngs testing |
topic | ORIGINAL REPORTS |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8140789/ https://www.ncbi.nlm.nih.gov/pubmed/33625867 http://dx.doi.org/10.1200/CCI.20.00142 |
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