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MRI-Based Radiomics Models for Predicting Risk Classification of Gastrointestinal Stromal Tumors

BACKGROUND: We conduct a study in developing and validating four MRI-based radiomics models to preoperatively predict the risk classification of gastrointestinal stromal tumors (GISTs). METHODS: Forty-one patients (low-risk = 17, intermediate-risk = 13, high-risk = 11) underwent MRI before surgery b...

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Autores principales: Mao, Haijia, Zhang, Bingqian, Zou, Mingyue, Huang, Yanan, Yang, Liming, Wang, Cheng, Pang, PeiPei, Zhao, Zhenhua
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8141866/
https://www.ncbi.nlm.nih.gov/pubmed/34041017
http://dx.doi.org/10.3389/fonc.2021.631927
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author Mao, Haijia
Zhang, Bingqian
Zou, Mingyue
Huang, Yanan
Yang, Liming
Wang, Cheng
Pang, PeiPei
Zhao, Zhenhua
author_facet Mao, Haijia
Zhang, Bingqian
Zou, Mingyue
Huang, Yanan
Yang, Liming
Wang, Cheng
Pang, PeiPei
Zhao, Zhenhua
author_sort Mao, Haijia
collection PubMed
description BACKGROUND: We conduct a study in developing and validating four MRI-based radiomics models to preoperatively predict the risk classification of gastrointestinal stromal tumors (GISTs). METHODS: Forty-one patients (low-risk = 17, intermediate-risk = 13, high-risk = 11) underwent MRI before surgery between September 2013 and March 2019 in this retrospective study. The Kruskal–Wallis test with Bonferonni correction and variance threshold was used to select appropriate features, and the Random Forest model (three classification model) was used to select features among the high-risk, intermediate-risk, and low-risk of GISTs. The predictive performance of the models built by the Random Forest was estimated by a 5-fold cross validation (5FCV). Their performance was estimated using the receiver operating characteristic (ROC) curve, summarized as the area under the ROC curve (AUC). Area under the curve (AUC), accuracy, sensitivity, and specificity for risk classification were reported. Linear discriminant analysis (LDA) was used to assess the discriminative ability of these radiomics models. RESULTS: The high-risk, intermediate-risk, and low-risk of GISTs were well classified by radiomics models, the micro-average of ROC curves was 0.85, 0.81, 0.87 and 0.94 for T1WI, T2WI, ADC and combined three MR sequences. And ROC curves achieved excellent AUCs for T1WI (0.85, 0.75 and 0.82), T2WI (0.69, 0.78 and 0.78), ADC (0.85, 0.77 and 0.80) and combined three MR sequences (0.96, 0.92, 0.81) for the diagnosis of high-risk, intermediate-risk, and low-risk of GISTs, respectively. In addition, LDA demonstrated the different risk of GISTs were correctly classified by radiomics analysis (61.0% for T1WI, 70.7% for T2WI, 83.3% for ADC, and 78.9% for the combined three MR sequences). CONCLUSIONS: Radiomics models based on a single sequence and combined three MR sequences can be a noninvasive method to evaluate the risk classification of GISTs, which may help the treatment of GISTs patients in the future.
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spelling pubmed-81418662021-05-25 MRI-Based Radiomics Models for Predicting Risk Classification of Gastrointestinal Stromal Tumors Mao, Haijia Zhang, Bingqian Zou, Mingyue Huang, Yanan Yang, Liming Wang, Cheng Pang, PeiPei Zhao, Zhenhua Front Oncol Oncology BACKGROUND: We conduct a study in developing and validating four MRI-based radiomics models to preoperatively predict the risk classification of gastrointestinal stromal tumors (GISTs). METHODS: Forty-one patients (low-risk = 17, intermediate-risk = 13, high-risk = 11) underwent MRI before surgery between September 2013 and March 2019 in this retrospective study. The Kruskal–Wallis test with Bonferonni correction and variance threshold was used to select appropriate features, and the Random Forest model (three classification model) was used to select features among the high-risk, intermediate-risk, and low-risk of GISTs. The predictive performance of the models built by the Random Forest was estimated by a 5-fold cross validation (5FCV). Their performance was estimated using the receiver operating characteristic (ROC) curve, summarized as the area under the ROC curve (AUC). Area under the curve (AUC), accuracy, sensitivity, and specificity for risk classification were reported. Linear discriminant analysis (LDA) was used to assess the discriminative ability of these radiomics models. RESULTS: The high-risk, intermediate-risk, and low-risk of GISTs were well classified by radiomics models, the micro-average of ROC curves was 0.85, 0.81, 0.87 and 0.94 for T1WI, T2WI, ADC and combined three MR sequences. And ROC curves achieved excellent AUCs for T1WI (0.85, 0.75 and 0.82), T2WI (0.69, 0.78 and 0.78), ADC (0.85, 0.77 and 0.80) and combined three MR sequences (0.96, 0.92, 0.81) for the diagnosis of high-risk, intermediate-risk, and low-risk of GISTs, respectively. In addition, LDA demonstrated the different risk of GISTs were correctly classified by radiomics analysis (61.0% for T1WI, 70.7% for T2WI, 83.3% for ADC, and 78.9% for the combined three MR sequences). CONCLUSIONS: Radiomics models based on a single sequence and combined three MR sequences can be a noninvasive method to evaluate the risk classification of GISTs, which may help the treatment of GISTs patients in the future. Frontiers Media S.A. 2021-05-10 /pmc/articles/PMC8141866/ /pubmed/34041017 http://dx.doi.org/10.3389/fonc.2021.631927 Text en Copyright © 2021 Mao, Zhang, Zou, Huang, Yang, Wang, Pang and Zhao https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Oncology
Mao, Haijia
Zhang, Bingqian
Zou, Mingyue
Huang, Yanan
Yang, Liming
Wang, Cheng
Pang, PeiPei
Zhao, Zhenhua
MRI-Based Radiomics Models for Predicting Risk Classification of Gastrointestinal Stromal Tumors
title MRI-Based Radiomics Models for Predicting Risk Classification of Gastrointestinal Stromal Tumors
title_full MRI-Based Radiomics Models for Predicting Risk Classification of Gastrointestinal Stromal Tumors
title_fullStr MRI-Based Radiomics Models for Predicting Risk Classification of Gastrointestinal Stromal Tumors
title_full_unstemmed MRI-Based Radiomics Models for Predicting Risk Classification of Gastrointestinal Stromal Tumors
title_short MRI-Based Radiomics Models for Predicting Risk Classification of Gastrointestinal Stromal Tumors
title_sort mri-based radiomics models for predicting risk classification of gastrointestinal stromal tumors
topic Oncology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8141866/
https://www.ncbi.nlm.nih.gov/pubmed/34041017
http://dx.doi.org/10.3389/fonc.2021.631927
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