Cargando…
Patterns of selection against centrosome amplification in human cell lines
The presence of extra centrioles, termed centrosome amplification, is a hallmark of cancer. The distribution of centriole numbers within a cancer cell population appears to be at an equilibrium maintained by centriole overproduction and selection, reminiscent of mutation-selection balance. It is unk...
Autores principales: | , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8143425/ https://www.ncbi.nlm.nih.gov/pubmed/33979341 http://dx.doi.org/10.1371/journal.pcbi.1008765 |
_version_ | 1783696751254831104 |
---|---|
author | Dias Louro, Marco António Bettencourt-Dias, Mónica Bank, Claudia |
author_facet | Dias Louro, Marco António Bettencourt-Dias, Mónica Bank, Claudia |
author_sort | Dias Louro, Marco António |
collection | PubMed |
description | The presence of extra centrioles, termed centrosome amplification, is a hallmark of cancer. The distribution of centriole numbers within a cancer cell population appears to be at an equilibrium maintained by centriole overproduction and selection, reminiscent of mutation-selection balance. It is unknown to date if the interaction between centriole overproduction and selection can quantitatively explain the intra- and inter-population heterogeneity in centriole numbers. Here, we define mutation-selection-like models and employ a model selection approach to infer patterns of centriole overproduction and selection in a diverse panel of human cell lines. Surprisingly, we infer strong and uniform selection against any number of extra centrioles in most cell lines. Finally we assess the accuracy and precision of our inference method and find that it increases non-linearly as a function of the number of sampled cells. We discuss the biological implications of our results and how our methodology can inform future experiments. |
format | Online Article Text |
id | pubmed-8143425 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-81434252021-06-07 Patterns of selection against centrosome amplification in human cell lines Dias Louro, Marco António Bettencourt-Dias, Mónica Bank, Claudia PLoS Comput Biol Research Article The presence of extra centrioles, termed centrosome amplification, is a hallmark of cancer. The distribution of centriole numbers within a cancer cell population appears to be at an equilibrium maintained by centriole overproduction and selection, reminiscent of mutation-selection balance. It is unknown to date if the interaction between centriole overproduction and selection can quantitatively explain the intra- and inter-population heterogeneity in centriole numbers. Here, we define mutation-selection-like models and employ a model selection approach to infer patterns of centriole overproduction and selection in a diverse panel of human cell lines. Surprisingly, we infer strong and uniform selection against any number of extra centrioles in most cell lines. Finally we assess the accuracy and precision of our inference method and find that it increases non-linearly as a function of the number of sampled cells. We discuss the biological implications of our results and how our methodology can inform future experiments. Public Library of Science 2021-05-12 /pmc/articles/PMC8143425/ /pubmed/33979341 http://dx.doi.org/10.1371/journal.pcbi.1008765 Text en © 2021 Dias Louro et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Dias Louro, Marco António Bettencourt-Dias, Mónica Bank, Claudia Patterns of selection against centrosome amplification in human cell lines |
title | Patterns of selection against centrosome amplification in human cell lines |
title_full | Patterns of selection against centrosome amplification in human cell lines |
title_fullStr | Patterns of selection against centrosome amplification in human cell lines |
title_full_unstemmed | Patterns of selection against centrosome amplification in human cell lines |
title_short | Patterns of selection against centrosome amplification in human cell lines |
title_sort | patterns of selection against centrosome amplification in human cell lines |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8143425/ https://www.ncbi.nlm.nih.gov/pubmed/33979341 http://dx.doi.org/10.1371/journal.pcbi.1008765 |
work_keys_str_mv | AT diaslouromarcoantonio patternsofselectionagainstcentrosomeamplificationinhumancelllines AT bettencourtdiasmonica patternsofselectionagainstcentrosomeamplificationinhumancelllines AT bankclaudia patternsofselectionagainstcentrosomeamplificationinhumancelllines |