Cargando…

The complete chloroplast genome sequence of Ferula sinkiangensis K. M. Shen, a precious and endangered traditional Chinese medicine

Ferula sinkiangensis K. M. Shen is a valuable traditional Chinese medicine historically used to treat stomachache and rheumatoid arthritis. The chloroplast genome of Ferula genus plant has not been previously reported. This study reported the complete chloroplast genome sequence of F. sinkiangensis...

Descripción completa

Detalles Bibliográficos
Autores principales: Fan, Congzhao, Wang, Guoping, Qiu, Yuanjin, Zhao, Yaqin, Zhang, Jizhao, Song, Jingyuan, Li, Xiaojin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8143607/
https://www.ncbi.nlm.nih.gov/pubmed/34104731
http://dx.doi.org/10.1080/23802359.2021.1927869
_version_ 1783696793096159232
author Fan, Congzhao
Wang, Guoping
Qiu, Yuanjin
Zhao, Yaqin
Zhang, Jizhao
Song, Jingyuan
Li, Xiaojin
author_facet Fan, Congzhao
Wang, Guoping
Qiu, Yuanjin
Zhao, Yaqin
Zhang, Jizhao
Song, Jingyuan
Li, Xiaojin
author_sort Fan, Congzhao
collection PubMed
description Ferula sinkiangensis K. M. Shen is a valuable traditional Chinese medicine historically used to treat stomachache and rheumatoid arthritis. The chloroplast genome of Ferula genus plant has not been previously reported. This study reported the complete chloroplast genome sequence of F. sinkiangensis based on high-throughput sequencing. The genome was 166,583 bp in length, containing a small single-copy (SSC) region of 17,595 bp and a large single-copy (LSC) region of 85,242 bp, separated by two inverted repeats (IRs) of 31,873 bp, each. The genome contained 114 unique genes, including 80 protein-coding genes (PCGs), four rRNA genes, and 30 tRNA genes. In addition, 17 genes contained one or two introns, including nine PCG genes with a single intron, two PCG genes harboring two introns, and six tRNA genes harboring a single intron. In this study, F. sinkiangensis K. M. had the closest genetic relationship with Torilis scabra and clustered with the Umbelliferae family species.
format Online
Article
Text
id pubmed-8143607
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-81436072021-06-07 The complete chloroplast genome sequence of Ferula sinkiangensis K. M. Shen, a precious and endangered traditional Chinese medicine Fan, Congzhao Wang, Guoping Qiu, Yuanjin Zhao, Yaqin Zhang, Jizhao Song, Jingyuan Li, Xiaojin Mitochondrial DNA B Resour Mitogenome Announcement Ferula sinkiangensis K. M. Shen is a valuable traditional Chinese medicine historically used to treat stomachache and rheumatoid arthritis. The chloroplast genome of Ferula genus plant has not been previously reported. This study reported the complete chloroplast genome sequence of F. sinkiangensis based on high-throughput sequencing. The genome was 166,583 bp in length, containing a small single-copy (SSC) region of 17,595 bp and a large single-copy (LSC) region of 85,242 bp, separated by two inverted repeats (IRs) of 31,873 bp, each. The genome contained 114 unique genes, including 80 protein-coding genes (PCGs), four rRNA genes, and 30 tRNA genes. In addition, 17 genes contained one or two introns, including nine PCG genes with a single intron, two PCG genes harboring two introns, and six tRNA genes harboring a single intron. In this study, F. sinkiangensis K. M. had the closest genetic relationship with Torilis scabra and clustered with the Umbelliferae family species. Taylor & Francis 2021-05-19 /pmc/articles/PMC8143607/ /pubmed/34104731 http://dx.doi.org/10.1080/23802359.2021.1927869 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Fan, Congzhao
Wang, Guoping
Qiu, Yuanjin
Zhao, Yaqin
Zhang, Jizhao
Song, Jingyuan
Li, Xiaojin
The complete chloroplast genome sequence of Ferula sinkiangensis K. M. Shen, a precious and endangered traditional Chinese medicine
title The complete chloroplast genome sequence of Ferula sinkiangensis K. M. Shen, a precious and endangered traditional Chinese medicine
title_full The complete chloroplast genome sequence of Ferula sinkiangensis K. M. Shen, a precious and endangered traditional Chinese medicine
title_fullStr The complete chloroplast genome sequence of Ferula sinkiangensis K. M. Shen, a precious and endangered traditional Chinese medicine
title_full_unstemmed The complete chloroplast genome sequence of Ferula sinkiangensis K. M. Shen, a precious and endangered traditional Chinese medicine
title_short The complete chloroplast genome sequence of Ferula sinkiangensis K. M. Shen, a precious and endangered traditional Chinese medicine
title_sort complete chloroplast genome sequence of ferula sinkiangensis k. m. shen, a precious and endangered traditional chinese medicine
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8143607/
https://www.ncbi.nlm.nih.gov/pubmed/34104731
http://dx.doi.org/10.1080/23802359.2021.1927869
work_keys_str_mv AT fancongzhao thecompletechloroplastgenomesequenceofferulasinkiangensiskmshenapreciousandendangeredtraditionalchinesemedicine
AT wangguoping thecompletechloroplastgenomesequenceofferulasinkiangensiskmshenapreciousandendangeredtraditionalchinesemedicine
AT qiuyuanjin thecompletechloroplastgenomesequenceofferulasinkiangensiskmshenapreciousandendangeredtraditionalchinesemedicine
AT zhaoyaqin thecompletechloroplastgenomesequenceofferulasinkiangensiskmshenapreciousandendangeredtraditionalchinesemedicine
AT zhangjizhao thecompletechloroplastgenomesequenceofferulasinkiangensiskmshenapreciousandendangeredtraditionalchinesemedicine
AT songjingyuan thecompletechloroplastgenomesequenceofferulasinkiangensiskmshenapreciousandendangeredtraditionalchinesemedicine
AT lixiaojin thecompletechloroplastgenomesequenceofferulasinkiangensiskmshenapreciousandendangeredtraditionalchinesemedicine
AT fancongzhao completechloroplastgenomesequenceofferulasinkiangensiskmshenapreciousandendangeredtraditionalchinesemedicine
AT wangguoping completechloroplastgenomesequenceofferulasinkiangensiskmshenapreciousandendangeredtraditionalchinesemedicine
AT qiuyuanjin completechloroplastgenomesequenceofferulasinkiangensiskmshenapreciousandendangeredtraditionalchinesemedicine
AT zhaoyaqin completechloroplastgenomesequenceofferulasinkiangensiskmshenapreciousandendangeredtraditionalchinesemedicine
AT zhangjizhao completechloroplastgenomesequenceofferulasinkiangensiskmshenapreciousandendangeredtraditionalchinesemedicine
AT songjingyuan completechloroplastgenomesequenceofferulasinkiangensiskmshenapreciousandendangeredtraditionalchinesemedicine
AT lixiaojin completechloroplastgenomesequenceofferulasinkiangensiskmshenapreciousandendangeredtraditionalchinesemedicine