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The complete chloroplast genome of Solanum betacea (Solanaceae, Solaneae)

Solanum betacea is a sub-tropical tree, and the fruit has high nutritional value, unique flavor and color. It is used as a functional ingredient in health care, food, cosmetic and pharmaceutical applications. The complete chloroplast(Cp) genome of S. betacea has been assembled and annotated in this...

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Autores principales: Li, Shi-Min, Zheng, Xin-Hua, Duan, Hua-Chao, Dong, Qiong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8143614/
https://www.ncbi.nlm.nih.gov/pubmed/34104725
http://dx.doi.org/10.1080/23802359.2021.1927219
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author Li, Shi-Min
Zheng, Xin-Hua
Duan, Hua-Chao
Dong, Qiong
author_facet Li, Shi-Min
Zheng, Xin-Hua
Duan, Hua-Chao
Dong, Qiong
author_sort Li, Shi-Min
collection PubMed
description Solanum betacea is a sub-tropical tree, and the fruit has high nutritional value, unique flavor and color. It is used as a functional ingredient in health care, food, cosmetic and pharmaceutical applications. The complete chloroplast(Cp) genome of S. betacea has been assembled and annotated in this paper. Its length was 155,937 bp, containing a large single-copy region of 86,731 bp, a small single-copy region of 18,450 bp, and a pair of IR regions of 25,378 bp in each. The complete chloroplast genome of S. betacea contained 134 genes, including 90 protein-coding genes, 36 transfer RNA genes (tRNAs), and 8 ribosome RNA genes (rRNAs). The overall GC content was 37.7% and the GC contents of the LSC, SSC, and IR regions were 35.7%, 31.8%, and 43.1%, respectively. Phylogenetic analysis with the reported chloroplast genomes revealed that S. betacea has been most closely related to Solanum torvum. These findings will provide useful information for further investigation of chloroplast genome evolution in Solanum betacea.
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spelling pubmed-81436142021-06-07 The complete chloroplast genome of Solanum betacea (Solanaceae, Solaneae) Li, Shi-Min Zheng, Xin-Hua Duan, Hua-Chao Dong, Qiong Mitochondrial DNA B Resour Rapid Communications Solanum betacea is a sub-tropical tree, and the fruit has high nutritional value, unique flavor and color. It is used as a functional ingredient in health care, food, cosmetic and pharmaceutical applications. The complete chloroplast(Cp) genome of S. betacea has been assembled and annotated in this paper. Its length was 155,937 bp, containing a large single-copy region of 86,731 bp, a small single-copy region of 18,450 bp, and a pair of IR regions of 25,378 bp in each. The complete chloroplast genome of S. betacea contained 134 genes, including 90 protein-coding genes, 36 transfer RNA genes (tRNAs), and 8 ribosome RNA genes (rRNAs). The overall GC content was 37.7% and the GC contents of the LSC, SSC, and IR regions were 35.7%, 31.8%, and 43.1%, respectively. Phylogenetic analysis with the reported chloroplast genomes revealed that S. betacea has been most closely related to Solanum torvum. These findings will provide useful information for further investigation of chloroplast genome evolution in Solanum betacea. Taylor & Francis 2021-05-17 /pmc/articles/PMC8143614/ /pubmed/34104725 http://dx.doi.org/10.1080/23802359.2021.1927219 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Rapid Communications
Li, Shi-Min
Zheng, Xin-Hua
Duan, Hua-Chao
Dong, Qiong
The complete chloroplast genome of Solanum betacea (Solanaceae, Solaneae)
title The complete chloroplast genome of Solanum betacea (Solanaceae, Solaneae)
title_full The complete chloroplast genome of Solanum betacea (Solanaceae, Solaneae)
title_fullStr The complete chloroplast genome of Solanum betacea (Solanaceae, Solaneae)
title_full_unstemmed The complete chloroplast genome of Solanum betacea (Solanaceae, Solaneae)
title_short The complete chloroplast genome of Solanum betacea (Solanaceae, Solaneae)
title_sort complete chloroplast genome of solanum betacea (solanaceae, solaneae)
topic Rapid Communications
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8143614/
https://www.ncbi.nlm.nih.gov/pubmed/34104725
http://dx.doi.org/10.1080/23802359.2021.1927219
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