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Existence of SARS-CoV-2 RNA on ambient particulate matter samples: A nationwide study in Turkey

Coronavirus disease 2019 (COVID-19) is caused by the SARS-CoV-2 virus and has been affecting the world since the end of 2019. The disease led to significant mortality and morbidity in Turkey, since the first case was reported on March 11th, 2020. Studies suggest a positive association between air po...

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Autores principales: Kayalar, Özgecan, Arı, Akif, Babuççu, Gizem, Konyalılar, Nur, Doğan, Özlem, Can, Füsun, Şahin, Ülkü A., Gaga, Eftade O., Levent Kuzu, S., Arı, Pelin Ertürk, Odabaşı, Mustafa, Taşdemir, Yücel, Sıddık Cindoruk, S., Esen, Fatma, Sakın, Egemen, Çalışkan, Burak, Tecer, Lokman H., Fıçıcı, Merve, Altın, Ahmet, Onat, Burcu, Ayvaz, Coşkun, Uzun, Burcu, Saral, Arslan, Döğeroğlu, Tuncay, Malkoç, Semra, Üzmez, Özlem Özden, Kunt, Fatma, Aydın, Senar, Kara, Melik, Yaman, Barış, Doğan, Güray, Olgun, Bihter, Dokumacı, Ebru N., Güllü, Gülen, Uzunpınar, Elif S., Bayram, Hasan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier B.V. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8144095/
https://www.ncbi.nlm.nih.gov/pubmed/34058581
http://dx.doi.org/10.1016/j.scitotenv.2021.147976
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author Kayalar, Özgecan
Arı, Akif
Babuççu, Gizem
Konyalılar, Nur
Doğan, Özlem
Can, Füsun
Şahin, Ülkü A.
Gaga, Eftade O.
Levent Kuzu, S.
Arı, Pelin Ertürk
Odabaşı, Mustafa
Taşdemir, Yücel
Sıddık Cindoruk, S.
Esen, Fatma
Sakın, Egemen
Çalışkan, Burak
Tecer, Lokman H.
Fıçıcı, Merve
Altın, Ahmet
Onat, Burcu
Ayvaz, Coşkun
Uzun, Burcu
Saral, Arslan
Döğeroğlu, Tuncay
Malkoç, Semra
Üzmez, Özlem Özden
Kunt, Fatma
Aydın, Senar
Kara, Melik
Yaman, Barış
Doğan, Güray
Olgun, Bihter
Dokumacı, Ebru N.
Güllü, Gülen
Uzunpınar, Elif S.
Bayram, Hasan
author_facet Kayalar, Özgecan
Arı, Akif
Babuççu, Gizem
Konyalılar, Nur
Doğan, Özlem
Can, Füsun
Şahin, Ülkü A.
Gaga, Eftade O.
Levent Kuzu, S.
Arı, Pelin Ertürk
Odabaşı, Mustafa
Taşdemir, Yücel
Sıddık Cindoruk, S.
Esen, Fatma
Sakın, Egemen
Çalışkan, Burak
Tecer, Lokman H.
Fıçıcı, Merve
Altın, Ahmet
Onat, Burcu
Ayvaz, Coşkun
Uzun, Burcu
Saral, Arslan
Döğeroğlu, Tuncay
Malkoç, Semra
Üzmez, Özlem Özden
Kunt, Fatma
Aydın, Senar
Kara, Melik
Yaman, Barış
Doğan, Güray
Olgun, Bihter
Dokumacı, Ebru N.
Güllü, Gülen
Uzunpınar, Elif S.
Bayram, Hasan
author_sort Kayalar, Özgecan
collection PubMed
description Coronavirus disease 2019 (COVID-19) is caused by the SARS-CoV-2 virus and has been affecting the world since the end of 2019. The disease led to significant mortality and morbidity in Turkey, since the first case was reported on March 11th, 2020. Studies suggest a positive association between air pollution and SARS-CoV-2 infection. The aim of the present study was to investigate the role of ambient particulate matters (PM), as potential carriers for SARS-CoV-2. Ambient PM samples in various size ranges were collected from 13 sites including urban and urban-background locations and hospital gardens in 10 cities across Turkey between 13th of May and 14th of June 2020 to investigate the possible presence of SARS-CoV-2 RNA on ambient PM. A total of 203 daily samples (TSP, n = 80; PM(2.5), n = 33; PM(2.5)(–)(10), n = 23; PM(10)μm, n = 19; and 6 size segregated PM, n = 48) were collected using various samplers. The N1 gene and RdRP gene expressions were analyzed for the presence of SARS-CoV-2, as suggested by the Centers for Disease Control and Prevention (CDC). According to real time (RT)-PCR and three-dimensional (3D) digital (d) PCR analysis, dual RdRP and N1 gene positivity were detected in 20 (9.8%) samples. Ambient PM-bound SARS-CoV-2 was analyzed quantitatively and the air concentrations of the virus ranged from 0.1 copies/m(3) to 23 copies/m(3). The highest percentages of virus detection on PM samples were from hospital gardens in Tekirdağ, Zonguldak, and Istanbul, especially in PM(2.5) mode. Findings of this study have suggested that SARS-CoV-2 may be transported by ambient particles, especially at sites close to the infection hot-spots. However, whether this has an impact on the spread of the virus infection remains to be determined.
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spelling pubmed-81440952021-05-25 Existence of SARS-CoV-2 RNA on ambient particulate matter samples: A nationwide study in Turkey Kayalar, Özgecan Arı, Akif Babuççu, Gizem Konyalılar, Nur Doğan, Özlem Can, Füsun Şahin, Ülkü A. Gaga, Eftade O. Levent Kuzu, S. Arı, Pelin Ertürk Odabaşı, Mustafa Taşdemir, Yücel Sıddık Cindoruk, S. Esen, Fatma Sakın, Egemen Çalışkan, Burak Tecer, Lokman H. Fıçıcı, Merve Altın, Ahmet Onat, Burcu Ayvaz, Coşkun Uzun, Burcu Saral, Arslan Döğeroğlu, Tuncay Malkoç, Semra Üzmez, Özlem Özden Kunt, Fatma Aydın, Senar Kara, Melik Yaman, Barış Doğan, Güray Olgun, Bihter Dokumacı, Ebru N. Güllü, Gülen Uzunpınar, Elif S. Bayram, Hasan Sci Total Environ Article Coronavirus disease 2019 (COVID-19) is caused by the SARS-CoV-2 virus and has been affecting the world since the end of 2019. The disease led to significant mortality and morbidity in Turkey, since the first case was reported on March 11th, 2020. Studies suggest a positive association between air pollution and SARS-CoV-2 infection. The aim of the present study was to investigate the role of ambient particulate matters (PM), as potential carriers for SARS-CoV-2. Ambient PM samples in various size ranges were collected from 13 sites including urban and urban-background locations and hospital gardens in 10 cities across Turkey between 13th of May and 14th of June 2020 to investigate the possible presence of SARS-CoV-2 RNA on ambient PM. A total of 203 daily samples (TSP, n = 80; PM(2.5), n = 33; PM(2.5)(–)(10), n = 23; PM(10)μm, n = 19; and 6 size segregated PM, n = 48) were collected using various samplers. The N1 gene and RdRP gene expressions were analyzed for the presence of SARS-CoV-2, as suggested by the Centers for Disease Control and Prevention (CDC). According to real time (RT)-PCR and three-dimensional (3D) digital (d) PCR analysis, dual RdRP and N1 gene positivity were detected in 20 (9.8%) samples. Ambient PM-bound SARS-CoV-2 was analyzed quantitatively and the air concentrations of the virus ranged from 0.1 copies/m(3) to 23 copies/m(3). The highest percentages of virus detection on PM samples were from hospital gardens in Tekirdağ, Zonguldak, and Istanbul, especially in PM(2.5) mode. Findings of this study have suggested that SARS-CoV-2 may be transported by ambient particles, especially at sites close to the infection hot-spots. However, whether this has an impact on the spread of the virus infection remains to be determined. Elsevier B.V. 2021-10-01 2021-05-25 /pmc/articles/PMC8144095/ /pubmed/34058581 http://dx.doi.org/10.1016/j.scitotenv.2021.147976 Text en © 2021 Elsevier B.V. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Kayalar, Özgecan
Arı, Akif
Babuççu, Gizem
Konyalılar, Nur
Doğan, Özlem
Can, Füsun
Şahin, Ülkü A.
Gaga, Eftade O.
Levent Kuzu, S.
Arı, Pelin Ertürk
Odabaşı, Mustafa
Taşdemir, Yücel
Sıddık Cindoruk, S.
Esen, Fatma
Sakın, Egemen
Çalışkan, Burak
Tecer, Lokman H.
Fıçıcı, Merve
Altın, Ahmet
Onat, Burcu
Ayvaz, Coşkun
Uzun, Burcu
Saral, Arslan
Döğeroğlu, Tuncay
Malkoç, Semra
Üzmez, Özlem Özden
Kunt, Fatma
Aydın, Senar
Kara, Melik
Yaman, Barış
Doğan, Güray
Olgun, Bihter
Dokumacı, Ebru N.
Güllü, Gülen
Uzunpınar, Elif S.
Bayram, Hasan
Existence of SARS-CoV-2 RNA on ambient particulate matter samples: A nationwide study in Turkey
title Existence of SARS-CoV-2 RNA on ambient particulate matter samples: A nationwide study in Turkey
title_full Existence of SARS-CoV-2 RNA on ambient particulate matter samples: A nationwide study in Turkey
title_fullStr Existence of SARS-CoV-2 RNA on ambient particulate matter samples: A nationwide study in Turkey
title_full_unstemmed Existence of SARS-CoV-2 RNA on ambient particulate matter samples: A nationwide study in Turkey
title_short Existence of SARS-CoV-2 RNA on ambient particulate matter samples: A nationwide study in Turkey
title_sort existence of sars-cov-2 rna on ambient particulate matter samples: a nationwide study in turkey
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8144095/
https://www.ncbi.nlm.nih.gov/pubmed/34058581
http://dx.doi.org/10.1016/j.scitotenv.2021.147976
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