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Integrative omics provide biological and clinical insights into acute respiratory distress syndrome
PURPOSE: Acute respiratory distress syndrome (ARDS) is accompanied by a dysfunctional immune-inflammatory response following lung injury, including during coronavirus disease 2019 (COVID-19). Limited causal biomarkers exist for ARDS development. We sought to identify novel genetic susceptibility tar...
Autores principales: | , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Berlin Heidelberg
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8144871/ https://www.ncbi.nlm.nih.gov/pubmed/34032881 http://dx.doi.org/10.1007/s00134-021-06410-5 |
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author | Du, Mulong Garcia, Joe G. N. Christie, Jason D. Xin, Junyi Cai, Guoshuai Meyer, Nuala J. Zhu, Zhaozhong Yuan, Qianyu Zhang, Zhengdong Su, Li Shen, Sipeng Dong, Xuesi Li, Hui Hutchinson, John N. Tejera, Paula Lin, Xihong Wang, Meilin Chen, Feng Christiani, David C. |
author_facet | Du, Mulong Garcia, Joe G. N. Christie, Jason D. Xin, Junyi Cai, Guoshuai Meyer, Nuala J. Zhu, Zhaozhong Yuan, Qianyu Zhang, Zhengdong Su, Li Shen, Sipeng Dong, Xuesi Li, Hui Hutchinson, John N. Tejera, Paula Lin, Xihong Wang, Meilin Chen, Feng Christiani, David C. |
author_sort | Du, Mulong |
collection | PubMed |
description | PURPOSE: Acute respiratory distress syndrome (ARDS) is accompanied by a dysfunctional immune-inflammatory response following lung injury, including during coronavirus disease 2019 (COVID-19). Limited causal biomarkers exist for ARDS development. We sought to identify novel genetic susceptibility targets for ARDS to focus further investigation on their biological mechanism and therapeutic potential. METHODS: Meta-analyses of ARDS genome-wide association studies were performed with 1250 cases and 1583 controls in Europeans, and 387 cases and 387 controls in African Americans. The functionality of novel loci was determined in silico using multiple omics approaches. The causality of 114 factors potentially involved in ARDS development was assessed using Mendelian Randomization analysis. RESULTS: There was distinct genetic heterogeneity in ARDS between Europeans and African Americans. rs7967111 at 12p13.2 was functionally associated with ARDS susceptibility in Europeans (odds ratio = 1.38; P = 2.15 × 10(–8)). Expression of two genes annotated at this locus, BORCS5 and DUSP16, was dynamic but ultimately decreased during ARDS development, as well as downregulated in immune cells alongside COVID-19 severity. Causal inference implied that comorbidity of inflammatory bowel disease and elevated levels of C-reactive protein and interleukin-10 causally increased ARDS risk, while vitamin D supplementation and vasodilator use ameliorated risk. CONCLUSION: Our findings suggest a novel susceptibility locus in ARDS pathophysiology that implicates BORCS5 and DUSP16 as potentially acting in immune-inflammatory processes. This locus warrants further investigation to inform the development of therapeutic targets and clinical care strategies for ARDS, including those induced by COVID-19. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s00134-021-06410-5. |
format | Online Article Text |
id | pubmed-8144871 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Springer Berlin Heidelberg |
record_format | MEDLINE/PubMed |
spelling | pubmed-81448712021-05-25 Integrative omics provide biological and clinical insights into acute respiratory distress syndrome Du, Mulong Garcia, Joe G. N. Christie, Jason D. Xin, Junyi Cai, Guoshuai Meyer, Nuala J. Zhu, Zhaozhong Yuan, Qianyu Zhang, Zhengdong Su, Li Shen, Sipeng Dong, Xuesi Li, Hui Hutchinson, John N. Tejera, Paula Lin, Xihong Wang, Meilin Chen, Feng Christiani, David C. Intensive Care Med Original PURPOSE: Acute respiratory distress syndrome (ARDS) is accompanied by a dysfunctional immune-inflammatory response following lung injury, including during coronavirus disease 2019 (COVID-19). Limited causal biomarkers exist for ARDS development. We sought to identify novel genetic susceptibility targets for ARDS to focus further investigation on their biological mechanism and therapeutic potential. METHODS: Meta-analyses of ARDS genome-wide association studies were performed with 1250 cases and 1583 controls in Europeans, and 387 cases and 387 controls in African Americans. The functionality of novel loci was determined in silico using multiple omics approaches. The causality of 114 factors potentially involved in ARDS development was assessed using Mendelian Randomization analysis. RESULTS: There was distinct genetic heterogeneity in ARDS between Europeans and African Americans. rs7967111 at 12p13.2 was functionally associated with ARDS susceptibility in Europeans (odds ratio = 1.38; P = 2.15 × 10(–8)). Expression of two genes annotated at this locus, BORCS5 and DUSP16, was dynamic but ultimately decreased during ARDS development, as well as downregulated in immune cells alongside COVID-19 severity. Causal inference implied that comorbidity of inflammatory bowel disease and elevated levels of C-reactive protein and interleukin-10 causally increased ARDS risk, while vitamin D supplementation and vasodilator use ameliorated risk. CONCLUSION: Our findings suggest a novel susceptibility locus in ARDS pathophysiology that implicates BORCS5 and DUSP16 as potentially acting in immune-inflammatory processes. This locus warrants further investigation to inform the development of therapeutic targets and clinical care strategies for ARDS, including those induced by COVID-19. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s00134-021-06410-5. Springer Berlin Heidelberg 2021-05-25 2021 /pmc/articles/PMC8144871/ /pubmed/34032881 http://dx.doi.org/10.1007/s00134-021-06410-5 Text en © Springer-Verlag GmbH Germany, part of Springer Nature 2021 This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic. |
spellingShingle | Original Du, Mulong Garcia, Joe G. N. Christie, Jason D. Xin, Junyi Cai, Guoshuai Meyer, Nuala J. Zhu, Zhaozhong Yuan, Qianyu Zhang, Zhengdong Su, Li Shen, Sipeng Dong, Xuesi Li, Hui Hutchinson, John N. Tejera, Paula Lin, Xihong Wang, Meilin Chen, Feng Christiani, David C. Integrative omics provide biological and clinical insights into acute respiratory distress syndrome |
title | Integrative omics provide biological and clinical insights into acute respiratory distress syndrome |
title_full | Integrative omics provide biological and clinical insights into acute respiratory distress syndrome |
title_fullStr | Integrative omics provide biological and clinical insights into acute respiratory distress syndrome |
title_full_unstemmed | Integrative omics provide biological and clinical insights into acute respiratory distress syndrome |
title_short | Integrative omics provide biological and clinical insights into acute respiratory distress syndrome |
title_sort | integrative omics provide biological and clinical insights into acute respiratory distress syndrome |
topic | Original |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8144871/ https://www.ncbi.nlm.nih.gov/pubmed/34032881 http://dx.doi.org/10.1007/s00134-021-06410-5 |
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