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Three-Finger Toxins from Brazilian Coral Snakes: From Molecular Framework to Insights in Biological Function
Studies on 3FTxs around the world are showing the amazing diversity in these proteins both in structure and function. In Brazil, we have not realized the broad variety of their amino acid sequences and probable diversified structures and targets. In this context, this work aims to conduct an in sili...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8147190/ https://www.ncbi.nlm.nih.gov/pubmed/33946590 http://dx.doi.org/10.3390/toxins13050328 |
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author | Kleiz-Ferreira, Jessica Matos Cirauqui, Nuria Trajano, Edson Araujo Almeida, Marcius da Silva Zingali, Russolina Benedeta |
author_facet | Kleiz-Ferreira, Jessica Matos Cirauqui, Nuria Trajano, Edson Araujo Almeida, Marcius da Silva Zingali, Russolina Benedeta |
author_sort | Kleiz-Ferreira, Jessica Matos |
collection | PubMed |
description | Studies on 3FTxs around the world are showing the amazing diversity in these proteins both in structure and function. In Brazil, we have not realized the broad variety of their amino acid sequences and probable diversified structures and targets. In this context, this work aims to conduct an in silico systematic study on available 3FTxs found in Micrurus species from Brazil. We elaborated a specific guideline for this toxin family. First, we grouped them according to their structural homologue predicted by HHPred server and further curated manually. For each group, we selected one sequence and constructed a representative structural model. By looking at conserved features and comparing with the information available in the literature for this toxin family, we managed to point to potential biological functions. In parallel, the phylogenetic relationship was estimated for our database by maximum likelihood analyses and a phylogenetic tree was constructed including the homologous 3FTx previously characterized. Our results highlighted an astonishing diversity inside this family of toxins, showing some groups with expected functional similarities to known 3FTxs, and pointing out others with potential novel roles and perhaps structures. Moreover, this classification guideline may be useful to aid future studies on these abundant toxins. |
format | Online Article Text |
id | pubmed-8147190 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-81471902021-05-26 Three-Finger Toxins from Brazilian Coral Snakes: From Molecular Framework to Insights in Biological Function Kleiz-Ferreira, Jessica Matos Cirauqui, Nuria Trajano, Edson Araujo Almeida, Marcius da Silva Zingali, Russolina Benedeta Toxins (Basel) Article Studies on 3FTxs around the world are showing the amazing diversity in these proteins both in structure and function. In Brazil, we have not realized the broad variety of their amino acid sequences and probable diversified structures and targets. In this context, this work aims to conduct an in silico systematic study on available 3FTxs found in Micrurus species from Brazil. We elaborated a specific guideline for this toxin family. First, we grouped them according to their structural homologue predicted by HHPred server and further curated manually. For each group, we selected one sequence and constructed a representative structural model. By looking at conserved features and comparing with the information available in the literature for this toxin family, we managed to point to potential biological functions. In parallel, the phylogenetic relationship was estimated for our database by maximum likelihood analyses and a phylogenetic tree was constructed including the homologous 3FTx previously characterized. Our results highlighted an astonishing diversity inside this family of toxins, showing some groups with expected functional similarities to known 3FTxs, and pointing out others with potential novel roles and perhaps structures. Moreover, this classification guideline may be useful to aid future studies on these abundant toxins. MDPI 2021-04-30 /pmc/articles/PMC8147190/ /pubmed/33946590 http://dx.doi.org/10.3390/toxins13050328 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Kleiz-Ferreira, Jessica Matos Cirauqui, Nuria Trajano, Edson Araujo Almeida, Marcius da Silva Zingali, Russolina Benedeta Three-Finger Toxins from Brazilian Coral Snakes: From Molecular Framework to Insights in Biological Function |
title | Three-Finger Toxins from Brazilian Coral Snakes: From Molecular Framework to Insights in Biological Function |
title_full | Three-Finger Toxins from Brazilian Coral Snakes: From Molecular Framework to Insights in Biological Function |
title_fullStr | Three-Finger Toxins from Brazilian Coral Snakes: From Molecular Framework to Insights in Biological Function |
title_full_unstemmed | Three-Finger Toxins from Brazilian Coral Snakes: From Molecular Framework to Insights in Biological Function |
title_short | Three-Finger Toxins from Brazilian Coral Snakes: From Molecular Framework to Insights in Biological Function |
title_sort | three-finger toxins from brazilian coral snakes: from molecular framework to insights in biological function |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8147190/ https://www.ncbi.nlm.nih.gov/pubmed/33946590 http://dx.doi.org/10.3390/toxins13050328 |
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