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PD-L1 and Immune Infiltration of m(6)A RNA Methylation Regulators and Its miRNA Regulators in Hepatocellular Carcinoma

BACKGROUND: The aim of this study was to systematically evaluate the relationship between the expression of m(6)A RNA methylation regulators and prognosis in HCC. METHODS: We compared the expression of m(6)A methylation modulators and PD-L1 between HCC and normal in TCGA database. HCC samples were d...

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Autores principales: Lin, Yingxue, Yao, Yinhui, Wang, Ying, Wang, Lingdi, Cui, Haipeng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8147529/
https://www.ncbi.nlm.nih.gov/pubmed/34055974
http://dx.doi.org/10.1155/2021/5516100
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author Lin, Yingxue
Yao, Yinhui
Wang, Ying
Wang, Lingdi
Cui, Haipeng
author_facet Lin, Yingxue
Yao, Yinhui
Wang, Ying
Wang, Lingdi
Cui, Haipeng
author_sort Lin, Yingxue
collection PubMed
description BACKGROUND: The aim of this study was to systematically evaluate the relationship between the expression of m(6)A RNA methylation regulators and prognosis in HCC. METHODS: We compared the expression of m(6)A methylation modulators and PD-L1 between HCC and normal in TCGA database. HCC samples were divided into two subtypes by consensus clustering of data from m(6)A RNA methylation regulators. The differences in PD-L1, immune infiltration, and prognosis between the two subtypes were further compared. The LASSO regression was used to build a risk score for m(6)A modulators. In addition, we identified miRNAs that regulate m(6)A regulators. RESULTS: We found that fourteen m(6)A regulatory genes were significantly differentially expressed between HCC and normal. HCC samples were divided into two clusters. Of these, there are higher PD-L1 expression and poorer overall survival (OS) in cluster 1. There was a significant difference in immune cell infiltration between cluster 1 and cluster 2. Through the LASSO model, we obtained 12 m(6)A methylation regulators to construct a prognostic risk score. Compared with patients with a high-risk score, patients with a low-risk score had upregulated PD-L1 expression and worse prognosis. There was a significant correlation between risk score and tumor-infiltrating immune cells. Finally, we found that miR-142 may be the important regulator for m(6)A RNA methylation in HCC. CONCLUSION: Our results suggest that m(6)A RNA methylation modulators may affect the prognosis through PD-L1 and immune cell infiltration in HCC patients. In addition, the two clusters may be beneficial for prognostic stratification and improving immunotherapeutic efficacy.
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spelling pubmed-81475292021-05-27 PD-L1 and Immune Infiltration of m(6)A RNA Methylation Regulators and Its miRNA Regulators in Hepatocellular Carcinoma Lin, Yingxue Yao, Yinhui Wang, Ying Wang, Lingdi Cui, Haipeng Biomed Res Int Research Article BACKGROUND: The aim of this study was to systematically evaluate the relationship between the expression of m(6)A RNA methylation regulators and prognosis in HCC. METHODS: We compared the expression of m(6)A methylation modulators and PD-L1 between HCC and normal in TCGA database. HCC samples were divided into two subtypes by consensus clustering of data from m(6)A RNA methylation regulators. The differences in PD-L1, immune infiltration, and prognosis between the two subtypes were further compared. The LASSO regression was used to build a risk score for m(6)A modulators. In addition, we identified miRNAs that regulate m(6)A regulators. RESULTS: We found that fourteen m(6)A regulatory genes were significantly differentially expressed between HCC and normal. HCC samples were divided into two clusters. Of these, there are higher PD-L1 expression and poorer overall survival (OS) in cluster 1. There was a significant difference in immune cell infiltration between cluster 1 and cluster 2. Through the LASSO model, we obtained 12 m(6)A methylation regulators to construct a prognostic risk score. Compared with patients with a high-risk score, patients with a low-risk score had upregulated PD-L1 expression and worse prognosis. There was a significant correlation between risk score and tumor-infiltrating immune cells. Finally, we found that miR-142 may be the important regulator for m(6)A RNA methylation in HCC. CONCLUSION: Our results suggest that m(6)A RNA methylation modulators may affect the prognosis through PD-L1 and immune cell infiltration in HCC patients. In addition, the two clusters may be beneficial for prognostic stratification and improving immunotherapeutic efficacy. Hindawi 2021-05-15 /pmc/articles/PMC8147529/ /pubmed/34055974 http://dx.doi.org/10.1155/2021/5516100 Text en Copyright © 2021 Yingxue Lin et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Lin, Yingxue
Yao, Yinhui
Wang, Ying
Wang, Lingdi
Cui, Haipeng
PD-L1 and Immune Infiltration of m(6)A RNA Methylation Regulators and Its miRNA Regulators in Hepatocellular Carcinoma
title PD-L1 and Immune Infiltration of m(6)A RNA Methylation Regulators and Its miRNA Regulators in Hepatocellular Carcinoma
title_full PD-L1 and Immune Infiltration of m(6)A RNA Methylation Regulators and Its miRNA Regulators in Hepatocellular Carcinoma
title_fullStr PD-L1 and Immune Infiltration of m(6)A RNA Methylation Regulators and Its miRNA Regulators in Hepatocellular Carcinoma
title_full_unstemmed PD-L1 and Immune Infiltration of m(6)A RNA Methylation Regulators and Its miRNA Regulators in Hepatocellular Carcinoma
title_short PD-L1 and Immune Infiltration of m(6)A RNA Methylation Regulators and Its miRNA Regulators in Hepatocellular Carcinoma
title_sort pd-l1 and immune infiltration of m(6)a rna methylation regulators and its mirna regulators in hepatocellular carcinoma
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8147529/
https://www.ncbi.nlm.nih.gov/pubmed/34055974
http://dx.doi.org/10.1155/2021/5516100
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