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Screening and Identifying m6A Regulators as an Independent Prognostic Biomarker in Pancreatic Cancer Based on The Cancer Genome Atlas Database

BACKGROUND: Pancreatic cancer is one of the most malignant tumors of the digestive system, and its treatment has rarely progressed for the last two decades. Studies on m6A regulators for the past few years have seemingly provided a novel approach for malignant tumor therapy. m6A-related factors may...

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Autores principales: Lin, Bi, Pan, Yangyang, Yu, Dinglai, Dai, Shengjie, Sun, Hongwei, Chen, Shengchuan, Zhang, Jie, Xiang, Yukai, Huang, Chaohao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8147537/
https://www.ncbi.nlm.nih.gov/pubmed/34055982
http://dx.doi.org/10.1155/2021/5573628
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author Lin, Bi
Pan, Yangyang
Yu, Dinglai
Dai, Shengjie
Sun, Hongwei
Chen, Shengchuan
Zhang, Jie
Xiang, Yukai
Huang, Chaohao
author_facet Lin, Bi
Pan, Yangyang
Yu, Dinglai
Dai, Shengjie
Sun, Hongwei
Chen, Shengchuan
Zhang, Jie
Xiang, Yukai
Huang, Chaohao
author_sort Lin, Bi
collection PubMed
description BACKGROUND: Pancreatic cancer is one of the most malignant tumors of the digestive system, and its treatment has rarely progressed for the last two decades. Studies on m6A regulators for the past few years have seemingly provided a novel approach for malignant tumor therapy. m6A-related factors may be potential biomarkers and therapeutic targets. This research is focused on the gene characteristics and clinical values of m6A regulators in predicting prognosis in pancreatic cancer. METHODS: In our study, we obtained gene expression profiles with copy number variation (CNV) data and clinical characteristic data of 186 patients with pancreatic cancer from The Cancer Genome Atlas (TCGA) portal. Then, we determined the alteration of m6a regulators and their correlation with clinicopathological features using the log-rank tests, Cox regression model, and chi-square test. Additionally, we validated the prognostic value of m6A regulators in the International Cancer Genome Consortium (ICGC). RESULTS: The results suggested that pancreatic cancer patients with ALKBH5 CNV were associated with worse overall survival and disease-free survival than those with diploid genes. Additionally, upregulation of the writer gene ALKBH5 had a positive correlation with the activation of AKT pathways in the TCGA database. CONCLUSION: Our study not only demonstrated genetic characteristic changes of m6A-related genes in pancreatic cancer and found a strong relationship between the changes of ALKBH5 and poor prognosis but also provided a novel therapeutic target for pancreatic cancer therapy.
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spelling pubmed-81475372021-05-27 Screening and Identifying m6A Regulators as an Independent Prognostic Biomarker in Pancreatic Cancer Based on The Cancer Genome Atlas Database Lin, Bi Pan, Yangyang Yu, Dinglai Dai, Shengjie Sun, Hongwei Chen, Shengchuan Zhang, Jie Xiang, Yukai Huang, Chaohao Biomed Res Int Research Article BACKGROUND: Pancreatic cancer is one of the most malignant tumors of the digestive system, and its treatment has rarely progressed for the last two decades. Studies on m6A regulators for the past few years have seemingly provided a novel approach for malignant tumor therapy. m6A-related factors may be potential biomarkers and therapeutic targets. This research is focused on the gene characteristics and clinical values of m6A regulators in predicting prognosis in pancreatic cancer. METHODS: In our study, we obtained gene expression profiles with copy number variation (CNV) data and clinical characteristic data of 186 patients with pancreatic cancer from The Cancer Genome Atlas (TCGA) portal. Then, we determined the alteration of m6a regulators and their correlation with clinicopathological features using the log-rank tests, Cox regression model, and chi-square test. Additionally, we validated the prognostic value of m6A regulators in the International Cancer Genome Consortium (ICGC). RESULTS: The results suggested that pancreatic cancer patients with ALKBH5 CNV were associated with worse overall survival and disease-free survival than those with diploid genes. Additionally, upregulation of the writer gene ALKBH5 had a positive correlation with the activation of AKT pathways in the TCGA database. CONCLUSION: Our study not only demonstrated genetic characteristic changes of m6A-related genes in pancreatic cancer and found a strong relationship between the changes of ALKBH5 and poor prognosis but also provided a novel therapeutic target for pancreatic cancer therapy. Hindawi 2021-05-15 /pmc/articles/PMC8147537/ /pubmed/34055982 http://dx.doi.org/10.1155/2021/5573628 Text en Copyright © 2021 Bi Lin et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Lin, Bi
Pan, Yangyang
Yu, Dinglai
Dai, Shengjie
Sun, Hongwei
Chen, Shengchuan
Zhang, Jie
Xiang, Yukai
Huang, Chaohao
Screening and Identifying m6A Regulators as an Independent Prognostic Biomarker in Pancreatic Cancer Based on The Cancer Genome Atlas Database
title Screening and Identifying m6A Regulators as an Independent Prognostic Biomarker in Pancreatic Cancer Based on The Cancer Genome Atlas Database
title_full Screening and Identifying m6A Regulators as an Independent Prognostic Biomarker in Pancreatic Cancer Based on The Cancer Genome Atlas Database
title_fullStr Screening and Identifying m6A Regulators as an Independent Prognostic Biomarker in Pancreatic Cancer Based on The Cancer Genome Atlas Database
title_full_unstemmed Screening and Identifying m6A Regulators as an Independent Prognostic Biomarker in Pancreatic Cancer Based on The Cancer Genome Atlas Database
title_short Screening and Identifying m6A Regulators as an Independent Prognostic Biomarker in Pancreatic Cancer Based on The Cancer Genome Atlas Database
title_sort screening and identifying m6a regulators as an independent prognostic biomarker in pancreatic cancer based on the cancer genome atlas database
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8147537/
https://www.ncbi.nlm.nih.gov/pubmed/34055982
http://dx.doi.org/10.1155/2021/5573628
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