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Towards theoretical spectroscopy with error bars: systematic quantification of the structural sensitivity of calculated spectra

Molecular spectra calculated with quantum-chemical methods are subject to a number of uncertainties (e.g., errors introduced by the computational methodology) that hamper the direct comparison of experiment and computation. Judging these uncertainties is crucial for drawing reliable conclusions from...

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Autores principales: Bergmann, Tobias G., Welzel, Michael O., Jacob, Christoph R.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society of Chemistry 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8148348/
https://www.ncbi.nlm.nih.gov/pubmed/34123280
http://dx.doi.org/10.1039/c9sc05103a
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author Bergmann, Tobias G.
Welzel, Michael O.
Jacob, Christoph R.
author_facet Bergmann, Tobias G.
Welzel, Michael O.
Jacob, Christoph R.
author_sort Bergmann, Tobias G.
collection PubMed
description Molecular spectra calculated with quantum-chemical methods are subject to a number of uncertainties (e.g., errors introduced by the computational methodology) that hamper the direct comparison of experiment and computation. Judging these uncertainties is crucial for drawing reliable conclusions from the interplay of experimental and theoretical spectroscopy, but largely relies on subjective judgment. Here, we explore the application of methods from uncertainty quantification to theoretical spectroscopy, with the ultimate goal of providing systematic error bars for calculated spectra. As a first target, we consider distortions of the underlying molecular structure as one important source of uncertainty. We show that by performing a principal component analysis, the most influential collective distortions can be identified, which allows for the construction of surrogate models that are amenable to a statistical analysis of the propagation of uncertainties in the molecular structure to uncertainties in the calculated spectrum. This is applied to the calculation of X-ray emission spectra of iron carbonyl complexes, of the electronic excitation spectrum of a coumarin dye, and of the infrared spectrum of alanine. We show that with our approach it becomes possible to obtain error bars for calculated spectra that account for uncertainties in the molecular structure. This is an important first step towards systematically quantifying other relevant sources of uncertainty in theoretical spectroscopy.
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spelling pubmed-81483482021-06-11 Towards theoretical spectroscopy with error bars: systematic quantification of the structural sensitivity of calculated spectra Bergmann, Tobias G. Welzel, Michael O. Jacob, Christoph R. Chem Sci Chemistry Molecular spectra calculated with quantum-chemical methods are subject to a number of uncertainties (e.g., errors introduced by the computational methodology) that hamper the direct comparison of experiment and computation. Judging these uncertainties is crucial for drawing reliable conclusions from the interplay of experimental and theoretical spectroscopy, but largely relies on subjective judgment. Here, we explore the application of methods from uncertainty quantification to theoretical spectroscopy, with the ultimate goal of providing systematic error bars for calculated spectra. As a first target, we consider distortions of the underlying molecular structure as one important source of uncertainty. We show that by performing a principal component analysis, the most influential collective distortions can be identified, which allows for the construction of surrogate models that are amenable to a statistical analysis of the propagation of uncertainties in the molecular structure to uncertainties in the calculated spectrum. This is applied to the calculation of X-ray emission spectra of iron carbonyl complexes, of the electronic excitation spectrum of a coumarin dye, and of the infrared spectrum of alanine. We show that with our approach it becomes possible to obtain error bars for calculated spectra that account for uncertainties in the molecular structure. This is an important first step towards systematically quantifying other relevant sources of uncertainty in theoretical spectroscopy. The Royal Society of Chemistry 2019-12-27 /pmc/articles/PMC8148348/ /pubmed/34123280 http://dx.doi.org/10.1039/c9sc05103a Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by-nc/3.0/
spellingShingle Chemistry
Bergmann, Tobias G.
Welzel, Michael O.
Jacob, Christoph R.
Towards theoretical spectroscopy with error bars: systematic quantification of the structural sensitivity of calculated spectra
title Towards theoretical spectroscopy with error bars: systematic quantification of the structural sensitivity of calculated spectra
title_full Towards theoretical spectroscopy with error bars: systematic quantification of the structural sensitivity of calculated spectra
title_fullStr Towards theoretical spectroscopy with error bars: systematic quantification of the structural sensitivity of calculated spectra
title_full_unstemmed Towards theoretical spectroscopy with error bars: systematic quantification of the structural sensitivity of calculated spectra
title_short Towards theoretical spectroscopy with error bars: systematic quantification of the structural sensitivity of calculated spectra
title_sort towards theoretical spectroscopy with error bars: systematic quantification of the structural sensitivity of calculated spectra
topic Chemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8148348/
https://www.ncbi.nlm.nih.gov/pubmed/34123280
http://dx.doi.org/10.1039/c9sc05103a
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