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Transcriptomic profile of the mice aging lung is associated with inflammation and apoptosis as important pathways
Aging is a universal biological process characterized by a progressive deterioration in functional capacity and an increased risk of morbidity and mortality over time. In the lungs, there are considerable changes in lung structure and function with advancing age; however, research on the transcripto...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8148450/ https://www.ncbi.nlm.nih.gov/pubmed/33982668 http://dx.doi.org/10.18632/aging.203039 |
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author | Calyeca, Jazmin Balderas-Martínez, Yalbi I. Selman, Moisés Pardo, Annie |
author_facet | Calyeca, Jazmin Balderas-Martínez, Yalbi I. Selman, Moisés Pardo, Annie |
author_sort | Calyeca, Jazmin |
collection | PubMed |
description | Aging is a universal biological process characterized by a progressive deterioration in functional capacity and an increased risk of morbidity and mortality over time. In the lungs, there are considerable changes in lung structure and function with advancing age; however, research on the transcriptomic profile implicated in this process is scanty. In this study, we addressed the lung transcriptome changes during aging, through a global gene expression analysis of normal lungs of mice aged 4- and 18-months old. Functional pathway enrichment analysis by Ingenuity Pathway Analysis (IPA) revealed that the most enriched signaling pathways in aged mice lungs are involved in the regulation of cell apoptosis, senescence, development, oxidative stress, and inflammation. We also found 25 miRNAs significantly different in the lungs of old mice compared with their younger littermates, eight of them upregulated and 17 downregulated. Using the miRNet database we identified TNFα, mTOR, TGFβ, WNT, FoxO, Apoptosis, Cell cycle, and p53 signaling pathways as the potential targets of several of the dysregulated miRNAs supporting that old lungs have increased susceptibility for apoptosis, inflammation, and fibrosis. These findings reveal differential expression profiles of genes and miRNAs affecting cell survival and the inflammatory response during lung aging. |
format | Online Article Text |
id | pubmed-8148450 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Impact Journals |
record_format | MEDLINE/PubMed |
spelling | pubmed-81484502021-05-26 Transcriptomic profile of the mice aging lung is associated with inflammation and apoptosis as important pathways Calyeca, Jazmin Balderas-Martínez, Yalbi I. Selman, Moisés Pardo, Annie Aging (Albany NY) Research Paper Aging is a universal biological process characterized by a progressive deterioration in functional capacity and an increased risk of morbidity and mortality over time. In the lungs, there are considerable changes in lung structure and function with advancing age; however, research on the transcriptomic profile implicated in this process is scanty. In this study, we addressed the lung transcriptome changes during aging, through a global gene expression analysis of normal lungs of mice aged 4- and 18-months old. Functional pathway enrichment analysis by Ingenuity Pathway Analysis (IPA) revealed that the most enriched signaling pathways in aged mice lungs are involved in the regulation of cell apoptosis, senescence, development, oxidative stress, and inflammation. We also found 25 miRNAs significantly different in the lungs of old mice compared with their younger littermates, eight of them upregulated and 17 downregulated. Using the miRNet database we identified TNFα, mTOR, TGFβ, WNT, FoxO, Apoptosis, Cell cycle, and p53 signaling pathways as the potential targets of several of the dysregulated miRNAs supporting that old lungs have increased susceptibility for apoptosis, inflammation, and fibrosis. These findings reveal differential expression profiles of genes and miRNAs affecting cell survival and the inflammatory response during lung aging. Impact Journals 2021-05-12 /pmc/articles/PMC8148450/ /pubmed/33982668 http://dx.doi.org/10.18632/aging.203039 Text en Copyright: © 2021 Calyeca et al. https://creativecommons.org/licenses/by/3.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Paper Calyeca, Jazmin Balderas-Martínez, Yalbi I. Selman, Moisés Pardo, Annie Transcriptomic profile of the mice aging lung is associated with inflammation and apoptosis as important pathways |
title | Transcriptomic profile of the mice aging lung is associated with inflammation and apoptosis as important pathways |
title_full | Transcriptomic profile of the mice aging lung is associated with inflammation and apoptosis as important pathways |
title_fullStr | Transcriptomic profile of the mice aging lung is associated with inflammation and apoptosis as important pathways |
title_full_unstemmed | Transcriptomic profile of the mice aging lung is associated with inflammation and apoptosis as important pathways |
title_short | Transcriptomic profile of the mice aging lung is associated with inflammation and apoptosis as important pathways |
title_sort | transcriptomic profile of the mice aging lung is associated with inflammation and apoptosis as important pathways |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8148450/ https://www.ncbi.nlm.nih.gov/pubmed/33982668 http://dx.doi.org/10.18632/aging.203039 |
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