Cargando…

Prognostic and immunological potential of PPM1G in hepatocellular carcinoma

Liver hepatocellular carcinoma (LIHC) remains one of the most common causes of cancer death. Prior research suggested that the PPM1G gene is involved in LIHC. To explore the role of PPM1G in LIHC, we used several online databases. Expression profiling was performed via the Gene Expression Profiling...

Descripción completa

Detalles Bibliográficos
Autores principales: Lin, Yi-Ren, Yang, Wen-Jing, Yang, Guo-Wang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Impact Journals 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8148464/
https://www.ncbi.nlm.nih.gov/pubmed/33952716
http://dx.doi.org/10.18632/aging.202964
_version_ 1783697844124778496
author Lin, Yi-Ren
Yang, Wen-Jing
Yang, Guo-Wang
author_facet Lin, Yi-Ren
Yang, Wen-Jing
Yang, Guo-Wang
author_sort Lin, Yi-Ren
collection PubMed
description Liver hepatocellular carcinoma (LIHC) remains one of the most common causes of cancer death. Prior research suggested that the PPM1G gene is involved in LIHC. To explore the role of PPM1G in LIHC, we used several online databases. Expression profiling was performed via the Gene Expression Profiling Interactive Analysis (GEPIA), Hepatocellular Carcinoma Database (HCCDB), Oncomine and Human Protein Atlas (HPA) platforms. Mutation profiles were investigated via cBio Cancer Genomics Portal (cBioPortal). Survival analysis was performed via the Kaplan–Meier (KM) plotter and International Cancer Genome Consortium (ICGC) platforms. The biological function of PPM1G was analyzed via the Enrichr database. The influence of PPM1G expression in the tumor immune microenvironment was assessed via Tumor Immune Estimation Resource (TIMER). PPM1G expression was upregulated in various tumors, including LIHC. Overexpression of PPM1G was associated with poor prognosis in LIHC. PPM1G expression might be regulated by promoter methylation, copy number variations (CNVs) and kinases and correlate with immune infiltration. The gene ontology (GO) terms associated with high PPM1G expression were mRNA splicing and the cell cycle. The results suggest that PPM1G is correlated with the prognosis of LIHC patients and associated with the tumor immune microenvironment in LIHC.
format Online
Article
Text
id pubmed-8148464
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Impact Journals
record_format MEDLINE/PubMed
spelling pubmed-81484642021-05-26 Prognostic and immunological potential of PPM1G in hepatocellular carcinoma Lin, Yi-Ren Yang, Wen-Jing Yang, Guo-Wang Aging (Albany NY) Research Paper Liver hepatocellular carcinoma (LIHC) remains one of the most common causes of cancer death. Prior research suggested that the PPM1G gene is involved in LIHC. To explore the role of PPM1G in LIHC, we used several online databases. Expression profiling was performed via the Gene Expression Profiling Interactive Analysis (GEPIA), Hepatocellular Carcinoma Database (HCCDB), Oncomine and Human Protein Atlas (HPA) platforms. Mutation profiles were investigated via cBio Cancer Genomics Portal (cBioPortal). Survival analysis was performed via the Kaplan–Meier (KM) plotter and International Cancer Genome Consortium (ICGC) platforms. The biological function of PPM1G was analyzed via the Enrichr database. The influence of PPM1G expression in the tumor immune microenvironment was assessed via Tumor Immune Estimation Resource (TIMER). PPM1G expression was upregulated in various tumors, including LIHC. Overexpression of PPM1G was associated with poor prognosis in LIHC. PPM1G expression might be regulated by promoter methylation, copy number variations (CNVs) and kinases and correlate with immune infiltration. The gene ontology (GO) terms associated with high PPM1G expression were mRNA splicing and the cell cycle. The results suggest that PPM1G is correlated with the prognosis of LIHC patients and associated with the tumor immune microenvironment in LIHC. Impact Journals 2021-05-05 /pmc/articles/PMC8148464/ /pubmed/33952716 http://dx.doi.org/10.18632/aging.202964 Text en Copyright: © 2021 Lin et al. https://creativecommons.org/licenses/by/3.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Paper
Lin, Yi-Ren
Yang, Wen-Jing
Yang, Guo-Wang
Prognostic and immunological potential of PPM1G in hepatocellular carcinoma
title Prognostic and immunological potential of PPM1G in hepatocellular carcinoma
title_full Prognostic and immunological potential of PPM1G in hepatocellular carcinoma
title_fullStr Prognostic and immunological potential of PPM1G in hepatocellular carcinoma
title_full_unstemmed Prognostic and immunological potential of PPM1G in hepatocellular carcinoma
title_short Prognostic and immunological potential of PPM1G in hepatocellular carcinoma
title_sort prognostic and immunological potential of ppm1g in hepatocellular carcinoma
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8148464/
https://www.ncbi.nlm.nih.gov/pubmed/33952716
http://dx.doi.org/10.18632/aging.202964
work_keys_str_mv AT linyiren prognosticandimmunologicalpotentialofppm1ginhepatocellularcarcinoma
AT yangwenjing prognosticandimmunologicalpotentialofppm1ginhepatocellularcarcinoma
AT yangguowang prognosticandimmunologicalpotentialofppm1ginhepatocellularcarcinoma