Cargando…

Establishment of open-source semi-automated behavioral analysis system and quantification of the difference of sexual motivation between laboratory and wild strains

Behavioral analysis plays an important role in wide variety of biological studies, but behavioral recordings often tend to be laborious and are associated with inevitable human-errors. It also takes much time to perform manual behavioral analyses while replaying the videos. On the other hand, presen...

Descripción completa

Detalles Bibliográficos
Autores principales: Tomihara, Soma, Oka, Yoshitaka, Kanda, Shinji
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8149402/
https://www.ncbi.nlm.nih.gov/pubmed/34035352
http://dx.doi.org/10.1038/s41598-021-90225-3
_version_ 1783697953654833152
author Tomihara, Soma
Oka, Yoshitaka
Kanda, Shinji
author_facet Tomihara, Soma
Oka, Yoshitaka
Kanda, Shinji
author_sort Tomihara, Soma
collection PubMed
description Behavioral analysis plays an important role in wide variety of biological studies, but behavioral recordings often tend to be laborious and are associated with inevitable human-errors. It also takes much time to perform manual behavioral analyses while replaying the videos. On the other hand, presently available automated recording/analysis systems are often specialized for certain types of behavior of specific animals. Here, we established an open-source behavioral recording system using Raspberry Pi, which automatically performs video-recording and systematic file-sorting, and the behavioral recording can be performed more efficiently, without unintentional human operational errors. We also developed an Excel macro that enables us to easily perform behavioral annotation with simple manipulation. Thus, we succeeded in developing an analysis suite that mitigates human tasks and thus reduces human errors. By using this suite, we analyzed the sexual behavior of a laboratory and a wild medaka strain and found a difference in sexual motivation presumably resulting from domestication.
format Online
Article
Text
id pubmed-8149402
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-81494022021-05-26 Establishment of open-source semi-automated behavioral analysis system and quantification of the difference of sexual motivation between laboratory and wild strains Tomihara, Soma Oka, Yoshitaka Kanda, Shinji Sci Rep Article Behavioral analysis plays an important role in wide variety of biological studies, but behavioral recordings often tend to be laborious and are associated with inevitable human-errors. It also takes much time to perform manual behavioral analyses while replaying the videos. On the other hand, presently available automated recording/analysis systems are often specialized for certain types of behavior of specific animals. Here, we established an open-source behavioral recording system using Raspberry Pi, which automatically performs video-recording and systematic file-sorting, and the behavioral recording can be performed more efficiently, without unintentional human operational errors. We also developed an Excel macro that enables us to easily perform behavioral annotation with simple manipulation. Thus, we succeeded in developing an analysis suite that mitigates human tasks and thus reduces human errors. By using this suite, we analyzed the sexual behavior of a laboratory and a wild medaka strain and found a difference in sexual motivation presumably resulting from domestication. Nature Publishing Group UK 2021-05-25 /pmc/articles/PMC8149402/ /pubmed/34035352 http://dx.doi.org/10.1038/s41598-021-90225-3 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Tomihara, Soma
Oka, Yoshitaka
Kanda, Shinji
Establishment of open-source semi-automated behavioral analysis system and quantification of the difference of sexual motivation between laboratory and wild strains
title Establishment of open-source semi-automated behavioral analysis system and quantification of the difference of sexual motivation between laboratory and wild strains
title_full Establishment of open-source semi-automated behavioral analysis system and quantification of the difference of sexual motivation between laboratory and wild strains
title_fullStr Establishment of open-source semi-automated behavioral analysis system and quantification of the difference of sexual motivation between laboratory and wild strains
title_full_unstemmed Establishment of open-source semi-automated behavioral analysis system and quantification of the difference of sexual motivation between laboratory and wild strains
title_short Establishment of open-source semi-automated behavioral analysis system and quantification of the difference of sexual motivation between laboratory and wild strains
title_sort establishment of open-source semi-automated behavioral analysis system and quantification of the difference of sexual motivation between laboratory and wild strains
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8149402/
https://www.ncbi.nlm.nih.gov/pubmed/34035352
http://dx.doi.org/10.1038/s41598-021-90225-3
work_keys_str_mv AT tomiharasoma establishmentofopensourcesemiautomatedbehavioralanalysissystemandquantificationofthedifferenceofsexualmotivationbetweenlaboratoryandwildstrains
AT okayoshitaka establishmentofopensourcesemiautomatedbehavioralanalysissystemandquantificationofthedifferenceofsexualmotivationbetweenlaboratoryandwildstrains
AT kandashinji establishmentofopensourcesemiautomatedbehavioralanalysissystemandquantificationofthedifferenceofsexualmotivationbetweenlaboratoryandwildstrains