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Machine Learning Based Clinical Decision Support System for Early COVID-19 Mortality Prediction

The coronavirus disease 2019 (COVID-19), caused by the virus SARS-CoV-2, is an acute respiratory disease that has been classified as a pandemic by the World Health Organization (WHO). The sudden spike in the number of infections and high mortality rates have put immense pressure on the public health...

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Autores principales: Karthikeyan, Akshaya, Garg, Akshit, Vinod, P. K., Priyakumar, U. Deva
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8149622/
https://www.ncbi.nlm.nih.gov/pubmed/34055710
http://dx.doi.org/10.3389/fpubh.2021.626697
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author Karthikeyan, Akshaya
Garg, Akshit
Vinod, P. K.
Priyakumar, U. Deva
author_facet Karthikeyan, Akshaya
Garg, Akshit
Vinod, P. K.
Priyakumar, U. Deva
author_sort Karthikeyan, Akshaya
collection PubMed
description The coronavirus disease 2019 (COVID-19), caused by the virus SARS-CoV-2, is an acute respiratory disease that has been classified as a pandemic by the World Health Organization (WHO). The sudden spike in the number of infections and high mortality rates have put immense pressure on the public healthcare systems. Hence, it is crucial to identify the key factors for mortality prediction to optimize patient treatment strategy. Different routine blood test results are widely available compared to other forms of data like X-rays, CT-scans, and ultrasounds for mortality prediction. This study proposes machine learning (ML) methods based on blood tests data to predict COVID-19 mortality risk. A powerful combination of five features: neutrophils, lymphocytes, lactate dehydrogenase (LDH), high-sensitivity C-reactive protein (hs-CRP), and age helps to predict mortality with 96% accuracy. Various ML models (neural networks, logistic regression, XGBoost, random forests, SVM, and decision trees) have been trained and performance compared to determine the model that achieves consistently high accuracy across the days that span the disease. The best performing method using XGBoost feature importance and neural network classification, predicts with an accuracy of 90% as early as 16 days before the outcome. Robust testing with three cases based on days to outcome confirms the strong predictive performance and practicality of the proposed model. A detailed analysis and identification of trends was performed using these key biomarkers to provide useful insights for intuitive application. This study provide solutions that would help accelerate the decision-making process in healthcare systems for focused medical treatments in an accurate, early, and reliable manner.
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spelling pubmed-81496222021-05-27 Machine Learning Based Clinical Decision Support System for Early COVID-19 Mortality Prediction Karthikeyan, Akshaya Garg, Akshit Vinod, P. K. Priyakumar, U. Deva Front Public Health Public Health The coronavirus disease 2019 (COVID-19), caused by the virus SARS-CoV-2, is an acute respiratory disease that has been classified as a pandemic by the World Health Organization (WHO). The sudden spike in the number of infections and high mortality rates have put immense pressure on the public healthcare systems. Hence, it is crucial to identify the key factors for mortality prediction to optimize patient treatment strategy. Different routine blood test results are widely available compared to other forms of data like X-rays, CT-scans, and ultrasounds for mortality prediction. This study proposes machine learning (ML) methods based on blood tests data to predict COVID-19 mortality risk. A powerful combination of five features: neutrophils, lymphocytes, lactate dehydrogenase (LDH), high-sensitivity C-reactive protein (hs-CRP), and age helps to predict mortality with 96% accuracy. Various ML models (neural networks, logistic regression, XGBoost, random forests, SVM, and decision trees) have been trained and performance compared to determine the model that achieves consistently high accuracy across the days that span the disease. The best performing method using XGBoost feature importance and neural network classification, predicts with an accuracy of 90% as early as 16 days before the outcome. Robust testing with three cases based on days to outcome confirms the strong predictive performance and practicality of the proposed model. A detailed analysis and identification of trends was performed using these key biomarkers to provide useful insights for intuitive application. This study provide solutions that would help accelerate the decision-making process in healthcare systems for focused medical treatments in an accurate, early, and reliable manner. Frontiers Media S.A. 2021-05-12 /pmc/articles/PMC8149622/ /pubmed/34055710 http://dx.doi.org/10.3389/fpubh.2021.626697 Text en Copyright © 2021 Karthikeyan, Garg, Vinod and Priyakumar. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Public Health
Karthikeyan, Akshaya
Garg, Akshit
Vinod, P. K.
Priyakumar, U. Deva
Machine Learning Based Clinical Decision Support System for Early COVID-19 Mortality Prediction
title Machine Learning Based Clinical Decision Support System for Early COVID-19 Mortality Prediction
title_full Machine Learning Based Clinical Decision Support System for Early COVID-19 Mortality Prediction
title_fullStr Machine Learning Based Clinical Decision Support System for Early COVID-19 Mortality Prediction
title_full_unstemmed Machine Learning Based Clinical Decision Support System for Early COVID-19 Mortality Prediction
title_short Machine Learning Based Clinical Decision Support System for Early COVID-19 Mortality Prediction
title_sort machine learning based clinical decision support system for early covid-19 mortality prediction
topic Public Health
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8149622/
https://www.ncbi.nlm.nih.gov/pubmed/34055710
http://dx.doi.org/10.3389/fpubh.2021.626697
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