Cargando…

Cancer-Associated circRNA–miRNA–mRNA Regulatory Networks: A Meta-Analysis

Recent advances in sequencing technologies and the discovery of non-coding RNAs (ncRNAs) have provided new insights in the molecular pathogenesis of cancers. Several studies have implicated the role of ncRNAs, including microRNAs (miRNAs), long non-coding RNAs (lncRNAs), and recently discovered circ...

Descripción completa

Detalles Bibliográficos
Autores principales: Khan, Shaheerah, Jha, Atimukta, Panda, Amaresh C., Dixit, Anshuman
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8149909/
https://www.ncbi.nlm.nih.gov/pubmed/34055888
http://dx.doi.org/10.3389/fmolb.2021.671309
_version_ 1783698048769064960
author Khan, Shaheerah
Jha, Atimukta
Panda, Amaresh C.
Dixit, Anshuman
author_facet Khan, Shaheerah
Jha, Atimukta
Panda, Amaresh C.
Dixit, Anshuman
author_sort Khan, Shaheerah
collection PubMed
description Recent advances in sequencing technologies and the discovery of non-coding RNAs (ncRNAs) have provided new insights in the molecular pathogenesis of cancers. Several studies have implicated the role of ncRNAs, including microRNAs (miRNAs), long non-coding RNAs (lncRNAs), and recently discovered circular RNAs (circRNAs) in tumorigenesis and metastasis. Unlike linear RNAs, circRNAs are highly stable and closed-loop RNA molecules. It has been established that circRNAs regulate gene expression by controlling the functions of miRNAs and RNA-binding protein (RBP) or by translating into proteins. The circRNA–miRNA–mRNA regulatory axis is associated with human diseases, such as cancers, Alzheimer’s disease, and diabetes. In this study, we explored the interaction among circRNAs, miRNAs, and their target genes in various cancers using state-of-the-art bioinformatics tools. We identified differentially expressed circRNAs, miRNAs, and mRNAs on multiple cancers from publicly available data. Furthermore, we identified many crucial drivers and tumor suppressor genes in the circRNA–miRNA–mRNA regulatory axis in various cancers. Together, this study data provide a deeper understanding of the circRNA–miRNA–mRNA regulatory mechanisms in cancers.
format Online
Article
Text
id pubmed-8149909
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-81499092021-05-27 Cancer-Associated circRNA–miRNA–mRNA Regulatory Networks: A Meta-Analysis Khan, Shaheerah Jha, Atimukta Panda, Amaresh C. Dixit, Anshuman Front Mol Biosci Molecular Biosciences Recent advances in sequencing technologies and the discovery of non-coding RNAs (ncRNAs) have provided new insights in the molecular pathogenesis of cancers. Several studies have implicated the role of ncRNAs, including microRNAs (miRNAs), long non-coding RNAs (lncRNAs), and recently discovered circular RNAs (circRNAs) in tumorigenesis and metastasis. Unlike linear RNAs, circRNAs are highly stable and closed-loop RNA molecules. It has been established that circRNAs regulate gene expression by controlling the functions of miRNAs and RNA-binding protein (RBP) or by translating into proteins. The circRNA–miRNA–mRNA regulatory axis is associated with human diseases, such as cancers, Alzheimer’s disease, and diabetes. In this study, we explored the interaction among circRNAs, miRNAs, and their target genes in various cancers using state-of-the-art bioinformatics tools. We identified differentially expressed circRNAs, miRNAs, and mRNAs on multiple cancers from publicly available data. Furthermore, we identified many crucial drivers and tumor suppressor genes in the circRNA–miRNA–mRNA regulatory axis in various cancers. Together, this study data provide a deeper understanding of the circRNA–miRNA–mRNA regulatory mechanisms in cancers. Frontiers Media S.A. 2021-05-12 /pmc/articles/PMC8149909/ /pubmed/34055888 http://dx.doi.org/10.3389/fmolb.2021.671309 Text en Copyright © 2021 Khan, Jha, Panda and Dixit. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Molecular Biosciences
Khan, Shaheerah
Jha, Atimukta
Panda, Amaresh C.
Dixit, Anshuman
Cancer-Associated circRNA–miRNA–mRNA Regulatory Networks: A Meta-Analysis
title Cancer-Associated circRNA–miRNA–mRNA Regulatory Networks: A Meta-Analysis
title_full Cancer-Associated circRNA–miRNA–mRNA Regulatory Networks: A Meta-Analysis
title_fullStr Cancer-Associated circRNA–miRNA–mRNA Regulatory Networks: A Meta-Analysis
title_full_unstemmed Cancer-Associated circRNA–miRNA–mRNA Regulatory Networks: A Meta-Analysis
title_short Cancer-Associated circRNA–miRNA–mRNA Regulatory Networks: A Meta-Analysis
title_sort cancer-associated circrna–mirna–mrna regulatory networks: a meta-analysis
topic Molecular Biosciences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8149909/
https://www.ncbi.nlm.nih.gov/pubmed/34055888
http://dx.doi.org/10.3389/fmolb.2021.671309
work_keys_str_mv AT khanshaheerah cancerassociatedcircrnamirnamrnaregulatorynetworksametaanalysis
AT jhaatimukta cancerassociatedcircrnamirnamrnaregulatorynetworksametaanalysis
AT pandaamareshc cancerassociatedcircrnamirnamrnaregulatorynetworksametaanalysis
AT dixitanshuman cancerassociatedcircrnamirnamrnaregulatorynetworksametaanalysis