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Bioinformatics analysis of Myelin Transcription Factor 1

BACKGROUND AND OBJECTIVE: We aimed to further study the role of Myelin Transcription Factor 1(MyT1) in tumor and other diseases and epigenetic regulation, and better understand the regulatory mechanism of MyT1. METHODS: Using bioinformatics analysis, the structure and function of MyT1sequence were p...

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Autores principales: Ding, Hongjun, Li, Yanju, Zhang, Yanlong, Meng, Huipeng, Wang, Keqiang, Sun, Qian, Li, Xichuan, Dong, Huajiang, Chen, Long, He, Feng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: IOS Press 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8150646/
https://www.ncbi.nlm.nih.gov/pubmed/33682781
http://dx.doi.org/10.3233/THC-218042
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author Ding, Hongjun
Li, Yanju
Zhang, Yanlong
Meng, Huipeng
Wang, Keqiang
Sun, Qian
Li, Xichuan
Dong, Huajiang
Chen, Long
He, Feng
author_facet Ding, Hongjun
Li, Yanju
Zhang, Yanlong
Meng, Huipeng
Wang, Keqiang
Sun, Qian
Li, Xichuan
Dong, Huajiang
Chen, Long
He, Feng
author_sort Ding, Hongjun
collection PubMed
description BACKGROUND AND OBJECTIVE: We aimed to further study the role of Myelin Transcription Factor 1(MyT1) in tumor and other diseases and epigenetic regulation, and better understand the regulatory mechanism of MyT1. METHODS: Using bioinformatics analysis, the structure and function of MyT1sequence were predicted and analyzed using bioinformatics analysis, and providing a theoretical basis for further experimental verification and understanding the regulatory mechanism of MyT1. The first, second and third-level structures of MyT1 were predicted and analyzed by bioinformatics analysis tools. RESULTS: MyT1 is found to be an unstable hydrophilic protein, rather than a secretory protein, with no signal peptide or trans-membrane domain; total amino acids located on the surface of the cell membrane. It contains seven zinc finger domains structurally. At sub-cellular level, MyT1 is localized in the nucleus. The phosphorylation site mainly exists in serine, and its secondary structure is mainly composed of random coils and alpha helices; the three-dimensional structure is analyzed by modeling. CONCLUSIONS: In this study, the structure and function of MyT1 protein were predicted, thereby providing a basis for subsequent expression analysis and functional research; it laid the foundation for further investigation of the molecular mechanism involved in the development of diseases.
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spelling pubmed-81506462021-06-09 Bioinformatics analysis of Myelin Transcription Factor 1 Ding, Hongjun Li, Yanju Zhang, Yanlong Meng, Huipeng Wang, Keqiang Sun, Qian Li, Xichuan Dong, Huajiang Chen, Long He, Feng Technol Health Care Research Article BACKGROUND AND OBJECTIVE: We aimed to further study the role of Myelin Transcription Factor 1(MyT1) in tumor and other diseases and epigenetic regulation, and better understand the regulatory mechanism of MyT1. METHODS: Using bioinformatics analysis, the structure and function of MyT1sequence were predicted and analyzed using bioinformatics analysis, and providing a theoretical basis for further experimental verification and understanding the regulatory mechanism of MyT1. The first, second and third-level structures of MyT1 were predicted and analyzed by bioinformatics analysis tools. RESULTS: MyT1 is found to be an unstable hydrophilic protein, rather than a secretory protein, with no signal peptide or trans-membrane domain; total amino acids located on the surface of the cell membrane. It contains seven zinc finger domains structurally. At sub-cellular level, MyT1 is localized in the nucleus. The phosphorylation site mainly exists in serine, and its secondary structure is mainly composed of random coils and alpha helices; the three-dimensional structure is analyzed by modeling. CONCLUSIONS: In this study, the structure and function of MyT1 protein were predicted, thereby providing a basis for subsequent expression analysis and functional research; it laid the foundation for further investigation of the molecular mechanism involved in the development of diseases. IOS Press 2021-03-25 /pmc/articles/PMC8150646/ /pubmed/33682781 http://dx.doi.org/10.3233/THC-218042 Text en © 2021 – The authors. Published by IOS Press. https://creativecommons.org/licenses/by-nc/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution Non-Commercial (CC BY-NC 4.0) License (https://creativecommons.org/licenses/by-nc/4.0/) , which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Ding, Hongjun
Li, Yanju
Zhang, Yanlong
Meng, Huipeng
Wang, Keqiang
Sun, Qian
Li, Xichuan
Dong, Huajiang
Chen, Long
He, Feng
Bioinformatics analysis of Myelin Transcription Factor 1
title Bioinformatics analysis of Myelin Transcription Factor 1
title_full Bioinformatics analysis of Myelin Transcription Factor 1
title_fullStr Bioinformatics analysis of Myelin Transcription Factor 1
title_full_unstemmed Bioinformatics analysis of Myelin Transcription Factor 1
title_short Bioinformatics analysis of Myelin Transcription Factor 1
title_sort bioinformatics analysis of myelin transcription factor 1
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8150646/
https://www.ncbi.nlm.nih.gov/pubmed/33682781
http://dx.doi.org/10.3233/THC-218042
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